Homologs in group_1578

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10250 FBDBKF_10250 100.0 Morganella morganii S1 - ABC-type uncharacterized transport system, periplasmic component
EHELCC_14585 EHELCC_14585 100.0 Morganella morganii S2 - ABC-type uncharacterized transport system, periplasmic component
NLDBIP_14415 NLDBIP_14415 100.0 Morganella morganii S4 - ABC-type uncharacterized transport system, periplasmic component
LHKJJB_14930 LHKJJB_14930 100.0 Morganella morganii S3 - ABC-type uncharacterized transport system, periplasmic component
F4V73_RS13965 F4V73_RS13965 77.6 Morganella psychrotolerans - DUF1007 family protein
PMI_RS07365 PMI_RS07365 43.7 Proteus mirabilis HI4320 - DUF1007 family protein

Distribution of the homologs in the orthogroup group_1578

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1578

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P44137 5.5e-37 131 37 4 204 3 HI_1249 Uncharacterized protein HI_1249 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_13550
Feature type CDS
Gene -
Product ABC-type uncharacterized transport system, periplasmic component
Location 137769 - 138422 (strand: -1)
Length 654 (nucleotides) / 217 (amino acids)

Contig

Accession ZDB_691
Length 141725 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1578
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF06226 Protein of unknown function (DUF1007)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3683 General function prediction only (R) R ABC-type uncharacterized transport system, periplasmic component

Protein Sequence

MNLIRRMNTLLLSFLFLLTFSPQVFAHPHSFIDMETTLVTENHTLRGIEYVWKMDPMTSADILYDLMNSKEDSPQWKKQAASVMANIIAQSYFSELNYQNKKQPLKLFPDTYRMTREGLQIVMSFRVSLLHPIPLAGSTIELKTYEPTFFVSMTYNGKRAVHLSPPDASQCRLVFTEADPSDTLKDYALSLDTGDTPDDDLTLGRQFAQQITLHCPE

Flanking regions ( +/- flanking 50bp)

TCCGTAACATTATGTTATGTTATAACATCTTTTGCCAGGTGAGATAATCTGTGAATTTAATCAGAAGAATGAATACGTTACTGCTCTCTTTCCTGTTTTTGCTGACATTCAGTCCGCAGGTGTTTGCACACCCGCACAGTTTTATTGATATGGAAACGACCCTTGTGACGGAAAACCATACGCTGAGGGGGATTGAATATGTCTGGAAAATGGATCCGATGACTTCCGCAGATATTCTGTATGATTTGATGAACAGCAAAGAAGACAGCCCGCAGTGGAAGAAGCAGGCAGCATCTGTGATGGCCAATATAATTGCACAGTCTTATTTTTCCGAACTGAATTATCAGAATAAAAAACAGCCTCTTAAACTCTTTCCGGACACCTACCGGATGACGCGTGAGGGATTACAGATTGTTATGTCATTCCGTGTCTCACTATTGCATCCGATACCGTTAGCCGGCAGTACCATTGAGCTGAAAACGTATGAACCGACTTTTTTTGTCAGTATGACCTACAACGGTAAACGCGCGGTTCACCTTTCTCCGCCGGATGCATCACAGTGCCGGTTAGTTTTTACCGAGGCAGATCCTTCGGATACCCTGAAAGATTACGCGCTGTCGCTGGATACCGGCGATACCCCGGATGATGACCTGACGCTCGGTCGCCAGTTTGCACAGCAGATCACCTTACATTGCCCGGAGTGAGATAACGGATGACATCATATTCACGGATTATTCTTCAGCTCACTGTTGTA