Homologs in group_213

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13810 FBDBKF_13810 42.9 Morganella morganii S1 betT Choline-glycine betaine transporter
EHELCC_11480 EHELCC_11480 42.9 Morganella morganii S2 betT Choline-glycine betaine transporter
NLDBIP_11825 NLDBIP_11825 42.9 Morganella morganii S4 betT Choline-glycine betaine transporter
LHKJJB_11685 LHKJJB_11685 42.9 Morganella morganii S3 betT Choline-glycine betaine transporter
HKOGLL_10295 HKOGLL_10295 42.9 Morganella morganii S5 betT Choline-glycine betaine transporter
F4V73_RS12675 F4V73_RS12675 42.5 Morganella psychrotolerans betT choline BCCT transporter BetT
PMI_RS01210 PMI_RS01210 43.7 Proteus mirabilis HI4320 betT choline BCCT transporter BetT
PMI_RS13075 PMI_RS13075 26.8 Proteus mirabilis HI4320 caiT L-carnitine/gamma-butyrobetaine antiporter

Distribution of the homologs in the orthogroup group_213

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_213

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ABC9 0.0 1079 76 1 679 1 betT High-affinity choline transport protein Escherichia coli (strain K12)
P0ABD0 0.0 1079 76 1 679 3 betT High-affinity choline transport protein Escherichia coli O157:H7
Q6FDF5 0.0 949 68 4 678 1 betT2 Osmo-dependent choline transporter BetT2 Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
Q6F754 2.35e-165 492 38 8 662 1 ACIAD3460 Glycine betaine transporter Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
G3XCN6 3.87e-155 468 38 8 673 1 betS Glycine betaine/proline betaine transporter BetS Rhizobium meliloti
Q6FDF6 1.79e-135 411 42 6 521 1 betT1 Osmo-independent choline transporter BetT1 Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P45335 9.73e-133 409 36 11 619 3 HI_1706 Uncharacterized transporter HI_1706 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A0A0B5RUB0 2.75e-125 385 40 3 501 2 tmaT Trimethylamine transporter Myroides profundi
P54417 2.78e-119 369 41 5 467 1 opuD Glycine betaine transporter OpuD Bacillus subtilis (strain 168)
Q9X4A5 2.14e-113 353 38 5 491 1 betL Glycine betaine transporter BetL Listeria monocytogenes
Q24SP9 2.36e-107 337 36 5 498 2 DSY3154 Probable glycine betaine transporter Desulfitobacterium hafniense (strain Y51)
Q79VE0 5.33e-101 325 35 8 540 1 ectP Ectoine/glycine betaine/proline transporter EctP Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q87PP5 9.44e-98 314 37 7 460 1 VP1456 Glycine betaine/proline/choline/ectoine transporter VP1456 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q87NZ5 3.06e-95 308 33 6 514 1 VP1723 Glycine betaine/proline/choline transporter VP1723 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q93AK1 1.63e-94 304 36 7 498 1 ectT Ectoine/hydroxyectoine transporter Virgibacillus pantothenticus
Q87NG3 2.28e-94 304 35 7 465 1 VP1905 Glycine betaine transporter 1 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q8NN75 4.55e-94 307 36 8 509 1 lcoP Betaine/ectoine transporter LcoP Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
P63696 6.56e-91 297 36 8 503 3 BQ2027_MB0941 Uncharacterized transporter Mb0941 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WPR7 6.56e-91 297 36 8 503 3 Rv0917 Uncharacterized transporter Rv0917 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WPR6 6.56e-91 297 36 8 503 3 MT0942 Uncharacterized transporter MT0942 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P54582 7.38e-90 295 34 9 503 1 betP Glycine betaine transporter BetP Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q87J97 1.32e-58 209 30 13 505 1 VPA0356 Glycine betaine transporter 2 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
P0ABD1 9.42e-49 181 28 8 450 3 yeaV Uncharacterized transporter YeaV Escherichia coli (strain K12)
P0ABD2 9.42e-49 181 28 8 450 3 yeaV Uncharacterized transporter YeaV Escherichia coli O157:H7
D0C9N4 2.09e-47 179 28 11 476 3 HMPREF0010_01347 Carnitine transporter Acinetobacter baumannii (strain ATCC 19606 / DSM 30007 / JCM 6841 / CCUG 19606 / CIP 70.34 / NBRC 109757 / NCIMB 12457 / NCTC 12156 / 81)
B5RGA7 5.57e-40 157 25 12 516 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella gallinarum (strain 287/91 / NCTC 13346)
B4EY22 3.95e-39 154 26 12 516 1 caiT L-carnitine/gamma-butyrobetaine antiporter Proteus mirabilis (strain HI4320)
Q8ZRX1 4.73e-39 154 25 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TWR7 4.73e-39 154 25 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella schwarzengrund (strain CVM19633)
C0Q4L6 4.73e-39 154 25 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella paratyphi C (strain RKS4594)
A9MYK0 4.73e-39 154 25 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B4T6J9 4.73e-39 154 25 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella newport (strain SL254)
B4TIH3 4.73e-39 154 25 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella heidelberg (strain SL476)
B5R1R3 4.73e-39 154 25 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella enteritidis PT4 (strain P125109)
B5FHG8 4.73e-39 154 25 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella dublin (strain CT_02021853)
B5F753 4.73e-39 154 25 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella agona (strain SL483)
B5BL58 6.08e-39 154 25 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella paratyphi A (strain AKU_12601)
Q5PIN5 6.08e-39 154 25 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57TI7 7.16e-39 154 25 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella choleraesuis (strain SC-B67)
A9MQH4 1.75e-38 152 25 11 509 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
P59334 3.07e-38 152 26 13 517 3 caiT L-carnitine/gamma-butyrobetaine antiporter Proteus sp. (strain LE138)
Q8Z9L1 6.76e-38 151 25 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella typhi
B7M0D7 3.23e-37 149 26 13 517 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O8 (strain IAI1)
B1LFX3 6.93e-37 148 25 13 518 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain SMS-3-5 / SECEC)
B1IRD6 6.93e-37 148 25 13 518 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
B7NHE4 6.93e-37 148 25 13 518 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B6HYZ1 7.13e-37 148 25 13 518 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain SE11)
Q3Z5W8 7.56e-37 148 25 13 518 3 caiT L-carnitine/gamma-butyrobetaine antiporter Shigella sonnei (strain Ss046)
Q1RGF8 7.56e-37 148 25 13 518 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain UTI89 / UPEC)
B7N7R5 7.56e-37 148 25 13 518 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P31553 7.56e-37 148 25 13 518 1 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain K12)
A1A790 7.56e-37 148 25 13 518 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O1:K1 / APEC
A7ZVZ0 7.56e-37 148 25 13 518 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O9:H4 (strain HS)
B1XBG5 7.56e-37 148 25 13 518 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain K12 / DH10B)
C4ZPW6 7.56e-37 148 25 13 518 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain K12 / MC4100 / BW2952)
B7L4G3 7.56e-37 148 25 13 518 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain 55989 / EAEC)
B7MAG3 7.56e-37 148 25 13 518 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O45:K1 (strain S88 / ExPEC)
A7ZHD1 7.56e-37 148 25 13 518 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O139:H28 (strain E24377A / ETEC)
B7MNP7 9.87e-37 147 25 13 518 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O81 (strain ED1a)
P59335 1.05e-36 147 25 13 518 3 caiT L-carnitine/gamma-butyrobetaine antiporter Shigella flexneri
P59333 1.25e-36 147 25 13 517 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TLU9 1.25e-36 147 25 13 517 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7UI86 1.25e-36 147 25 13 517 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O127:H6 (strain E2348/69 / EPEC)
B7LWN1 2.61e-36 146 25 12 514 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q0T8F4 4.98e-36 145 25 13 518 3 caiT L-carnitine/gamma-butyrobetaine antiporter Shigella flexneri serotype 5b (strain 8401)
A8ALR3 5.39e-36 145 25 14 520 3 caiT L-carnitine/gamma-butyrobetaine antiporter Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
B5YYD4 3.11e-35 143 25 13 517 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XA30 3.11e-35 143 25 13 517 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O157:H7
Q32K57 3.2e-35 143 25 13 518 3 caiT L-carnitine/gamma-butyrobetaine antiporter Shigella dysenteriae serotype 1 (strain Sd197)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS07075
Feature type CDS
Gene -
Product choline transporter
Location 1543702 - 1545744 (strand: 1)
Length 2043 (nucleotides) / 680 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_213
Orthogroup size 9
N. genomes 7

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Genomic region

Domains

PF02028 BCCT, betaine/carnitine/choline family transporter

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1292 Cell wall/membrane/envelope biogenesis (M) M Choline-glycine betaine transporter

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02168 choline/glycine/proline betaine transport protein - -

Protein Sequence

MTTLNSSKKPQKDKLNSVVFFASATLILAFSFFTILMTDTANAWIIKTLGWVSKTFGWYYLLAATLYIVFVIFVATSRFGNIKLGPEQSKPEFSVLSWSAMLFAAGIGIDLMFFSVAEPITQYMLPPTGEGETIEAARQSMVWTLFHYGLTGWSMYALIGIALGYFSYRYNLPLTIRSALYPIFGNRIYGPIGHTVDIAAVLGTIFGIATTLGIGVVQLNYGLKVLFDLPQGLGVQGGLILLSVIMAVISATSGVNKGIRILSELNVLLALGLILFILFAGDTEFLLNALVLNVGDYVNRFLGMTLNSFAFDRPTDWMNSWTLFFWAWWVAWSPFVGLFLARISRGRTIRQFVIGTLIIPFVFTLLWLSIFGNSALYEVIHGNQTFAETVLASPEKGFYSLLELYPGFGLTASVATITGLLFYVTSADSGSLVLGNFTSQLSDINNDAPNWLRIFWSIAIGLLTLGMLMADGVSALQNTTVIMGLPFSFVIFFIMAGLYKSLKVEDFRRVSSLNTNAPAPLYGNTTMNWKQRLGRVMNFPGTTYTQRMLDLVCTPAMQDVANELSLRGANVSFNLYPLEEEPRLNHLELVVDLGQEQHFIYQIWPQKYSVPAFTYRARRGKSHYYRLETYLWEGSQGNDLMDYTKEQVISDILDQYEKHLNFIHLSREAPGATLTFPESN

Flanking regions ( +/- flanking 50bp)

CAAAGAATGCAACTTTTAACTTTTAGATGAATAAATTTTTGGAATTTCTGATGACAACTCTTAATAGCTCAAAAAAACCACAGAAAGACAAGCTCAATTCTGTTGTTTTTTTCGCTTCCGCAACGCTGATTTTAGCGTTCTCTTTTTTCACTATTTTAATGACAGATACCGCCAATGCGTGGATCATTAAAACACTAGGTTGGGTATCAAAAACCTTTGGTTGGTACTATTTATTAGCGGCAACTTTGTACATTGTTTTCGTTATTTTCGTTGCCACATCTCGCTTTGGTAATATTAAATTAGGCCCAGAACAATCAAAGCCTGAATTTAGTGTATTAAGCTGGTCTGCTATGTTGTTTGCCGCGGGGATCGGGATTGACTTAATGTTTTTCTCAGTCGCTGAGCCTATTACCCAATATATGCTACCGCCTACTGGCGAAGGTGAAACAATAGAAGCAGCCCGTCAGTCGATGGTGTGGACATTATTCCACTATGGCCTGACGGGCTGGTCTATGTATGCACTGATTGGTATTGCACTCGGGTATTTTAGTTATCGTTATAATTTACCCTTGACCATCCGCTCTGCACTTTATCCTATCTTTGGTAATCGTATTTATGGCCCCATCGGTCATACGGTCGATATTGCTGCCGTATTGGGTACTATTTTTGGTATTGCCACCACCTTAGGTATTGGCGTAGTACAACTTAATTATGGGTTGAAAGTTCTCTTCGATTTACCGCAAGGGTTAGGTGTACAAGGTGGTTTAATTCTACTTTCCGTAATTATGGCGGTGATCTCAGCCACATCAGGCGTCAATAAAGGCATACGTATTCTTTCAGAATTAAATGTATTACTCGCTTTAGGGTTAATTTTATTTATCCTATTTGCTGGTGATACTGAATTTTTATTAAATGCGTTAGTACTTAATGTCGGTGATTATGTAAATCGATTCTTAGGAATGACACTAAATAGCTTTGCTTTTGATAGACCGACGGATTGGATGAATAGCTGGACACTTTTCTTCTGGGCTTGGTGGGTTGCTTGGTCACCTTTTGTGGGCTTATTTTTAGCACGTATCTCAAGGGGGAGAACTATCCGTCAATTCGTTATAGGCACCTTGATCATCCCTTTTGTATTCACGCTATTATGGTTGTCTATCTTTGGTAATAGTGCACTTTATGAAGTGATCCACGGTAATCAAACCTTTGCTGAAACAGTATTAGCCTCACCAGAAAAAGGCTTTTATTCTTTACTTGAACTCTATCCGGGATTTGGTTTAACTGCTTCCGTAGCGACTATTACAGGATTACTTTTCTATGTAACCTCGGCAGACTCCGGTTCATTAGTTTTAGGTAATTTCACTTCTCAACTGAGTGATATAAATAATGATGCCCCAAATTGGCTGCGCATATTCTGGTCTATCGCTATTGGTCTATTAACATTAGGTATGTTAATGGCAGACGGGGTTTCTGCTTTGCAAAATACCACGGTTATTATGGGATTACCTTTTAGCTTTGTTATTTTCTTTATTATGGCAGGACTATATAAGTCATTAAAAGTAGAAGATTTTAGACGCGTCAGTTCATTAAACACCAATGCGCCAGCACCTCTTTATGGTAACACCACCATGAACTGGAAACAGCGTCTAGGTCGAGTGATGAATTTCCCAGGTACTACCTATACCCAACGGATGTTAGATTTAGTTTGTACCCCAGCGATGCAAGATGTGGCTAATGAGCTGTCATTACGTGGTGCAAATGTCTCGTTTAATCTTTACCCGCTGGAAGAAGAGCCTCGTTTAAACCATTTAGAATTAGTGGTTGATTTAGGCCAAGAGCAGCATTTTATTTATCAAATATGGCCACAAAAATATTCAGTACCTGCATTTACTTATCGTGCTCGTCGAGGAAAATCCCATTATTACCGGCTAGAAACCTATTTATGGGAAGGTTCACAGGGTAACGATTTAATGGACTACACCAAGGAGCAAGTGATCAGTGATATTCTCGACCAATATGAAAAACACTTAAACTTTATTCACTTAAGTCGTGAAGCGCCCGGTGCAACATTAACATTTCCAGAATCAAATTAATTAGCGACTGAGCTATCTTATCTCTCAAGGGAACCCGTTTTATCGGTTCC