Homologs in group_213

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8 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13810 FBDBKF_13810 92.0 Morganella morganii S1 betT Choline-glycine betaine transporter
EHELCC_11480 EHELCC_11480 92.0 Morganella morganii S2 betT Choline-glycine betaine transporter
NLDBIP_11825 NLDBIP_11825 92.0 Morganella morganii S4 betT Choline-glycine betaine transporter
LHKJJB_11685 LHKJJB_11685 92.0 Morganella morganii S3 betT Choline-glycine betaine transporter
HKOGLL_10295 HKOGLL_10295 92.0 Morganella morganii S5 betT Choline-glycine betaine transporter
PMI_RS01210 PMI_RS01210 81.7 Proteus mirabilis HI4320 betT choline BCCT transporter BetT
PMI_RS07075 PMI_RS07075 42.5 Proteus mirabilis HI4320 - choline transporter
PMI_RS13075 PMI_RS13075 27.8 Proteus mirabilis HI4320 caiT L-carnitine/gamma-butyrobetaine antiporter

Distribution of the homologs in the orthogroup group_213

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_213

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q6F754 0.0 673 52 5 651 1 ACIAD3460 Glycine betaine transporter Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
G3XCN6 0.0 643 49 6 653 1 betS Glycine betaine/proline betaine transporter BetS Rhizobium meliloti
Q6FDF5 2.43e-180 531 40 5 668 1 betT2 Osmo-dependent choline transporter BetT2 Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P0ABC9 3.64e-180 530 41 7 670 1 betT High-affinity choline transport protein Escherichia coli (strain K12)
P0ABD0 3.64e-180 530 41 7 670 3 betT High-affinity choline transport protein Escherichia coli O157:H7
A0A0B5RUB0 4.36e-163 481 49 3 494 2 tmaT Trimethylamine transporter Myroides profundi
P45335 3.36e-157 471 39 10 671 3 HI_1706 Uncharacterized transporter HI_1706 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q6FDF6 1.92e-145 436 44 3 515 1 betT1 Osmo-independent choline transporter BetT1 Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
Q87NZ5 3.86e-141 426 43 5 523 1 VP1723 Glycine betaine/proline/choline transporter VP1723 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
P54417 1.54e-139 421 46 4 476 1 opuD Glycine betaine transporter OpuD Bacillus subtilis (strain 168)
Q9X4A5 4.62e-138 416 45 3 490 1 betL Glycine betaine transporter BetL Listeria monocytogenes
Q24SP9 2.95e-134 406 42 3 494 2 DSY3154 Probable glycine betaine transporter Desulfitobacterium hafniense (strain Y51)
P63696 1.15e-131 403 46 6 499 3 BQ2027_MB0941 Uncharacterized transporter Mb0941 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WPR7 1.15e-131 403 46 6 499 3 Rv0917 Uncharacterized transporter Rv0917 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WPR6 1.15e-131 403 46 6 499 3 MT0942 Uncharacterized transporter MT0942 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q87NG3 3.39e-130 397 43 9 515 1 VP1905 Glycine betaine transporter 1 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q87PP5 1.41e-128 394 42 10 513 1 VP1456 Glycine betaine/proline/choline/ectoine transporter VP1456 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q79VE0 2.03e-126 390 40 7 523 1 ectP Ectoine/glycine betaine/proline transporter EctP Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q93AK1 4.13e-107 336 39 9 508 1 ectT Ectoine/hydroxyectoine transporter Virgibacillus pantothenticus
P54582 5.88e-100 321 37 12 555 1 betP Glycine betaine transporter BetP Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q8NN75 2.61e-90 296 36 4 504 1 lcoP Betaine/ectoine transporter LcoP Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q87J97 2.1e-62 219 32 12 449 1 VPA0356 Glycine betaine transporter 2 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
P0ABD1 9.32e-53 192 31 14 468 3 yeaV Uncharacterized transporter YeaV Escherichia coli (strain K12)
P0ABD2 9.32e-53 192 31 14 468 3 yeaV Uncharacterized transporter YeaV Escherichia coli O157:H7
D0C9N4 4.21e-51 189 30 19 523 3 HMPREF0010_01347 Carnitine transporter Acinetobacter baumannii (strain ATCC 19606 / DSM 30007 / JCM 6841 / CCUG 19606 / CIP 70.34 / NBRC 109757 / NCIMB 12457 / NCTC 12156 / 81)
Q57TI7 2.25e-48 180 27 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella choleraesuis (strain SC-B67)
B5BL58 3.19e-48 180 27 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella paratyphi A (strain AKU_12601)
Q5PIN5 3.19e-48 180 27 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q8ZRX1 3.42e-48 180 27 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TWR7 3.42e-48 180 27 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella schwarzengrund (strain CVM19633)
C0Q4L6 3.42e-48 180 27 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella paratyphi C (strain RKS4594)
A9MYK0 3.42e-48 180 27 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B4T6J9 3.42e-48 180 27 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella newport (strain SL254)
B4TIH3 3.42e-48 180 27 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella heidelberg (strain SL476)
B5R1R3 3.42e-48 180 27 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella enteritidis PT4 (strain P125109)
B5FHG8 3.42e-48 180 27 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella dublin (strain CT_02021853)
B5F753 3.42e-48 180 27 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella agona (strain SL483)
B5RGA7 4.13e-48 179 27 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella gallinarum (strain 287/91 / NCTC 13346)
A9MQH4 6.28e-48 179 28 12 510 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B7MNP7 6.61e-48 179 28 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O81 (strain ED1a)
Q8Z9L1 1.61e-47 178 27 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella typhi
B7M0D7 2.22e-47 177 28 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O8 (strain IAI1)
B4EY22 2.56e-47 177 27 13 514 1 caiT L-carnitine/gamma-butyrobetaine antiporter Proteus mirabilis (strain HI4320)
A8ALR3 3.24e-47 177 27 11 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
P59333 3.31e-47 177 28 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TLU9 3.31e-47 177 28 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7UI86 3.31e-47 177 28 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q3Z5W8 3.58e-47 177 28 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Shigella sonnei (strain Ss046)
Q1RGF8 3.58e-47 177 28 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain UTI89 / UPEC)
B7N7R5 3.58e-47 177 28 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P31553 3.58e-47 177 28 11 488 1 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain K12)
A1A790 3.58e-47 177 28 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O1:K1 / APEC
A7ZVZ0 3.58e-47 177 28 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O9:H4 (strain HS)
B1XBG5 3.58e-47 177 28 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain K12 / DH10B)
C4ZPW6 3.58e-47 177 28 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain K12 / MC4100 / BW2952)
B7L4G3 3.58e-47 177 28 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain 55989 / EAEC)
B7MAG3 3.58e-47 177 28 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O45:K1 (strain S88 / ExPEC)
A7ZHD1 3.58e-47 177 28 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O139:H28 (strain E24377A / ETEC)
B1LFX3 3.99e-47 177 28 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain SMS-3-5 / SECEC)
B1IRD6 3.99e-47 177 28 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
B7NHE4 3.99e-47 177 28 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O7:K1 (strain IAI39 / ExPEC)
P59334 6.24e-47 176 27 13 512 3 caiT L-carnitine/gamma-butyrobetaine antiporter Proteus sp. (strain LE138)
B6HYZ1 6.75e-47 176 27 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain SE11)
P59335 2.22e-46 175 27 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Shigella flexneri
Q0T8F4 8.27e-46 173 28 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Shigella flexneri serotype 5b (strain 8401)
B5YYD4 3.08e-45 172 27 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XA30 3.08e-45 172 27 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O157:H7
B7LWN1 3.71e-45 171 27 10 486 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q32K57 3.9e-45 171 27 11 488 3 caiT L-carnitine/gamma-butyrobetaine antiporter Shigella dysenteriae serotype 1 (strain Sd197)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12675
Feature type CDS
Gene betT
Product choline BCCT transporter BetT
Location 132943 - 134943 (strand: 1)
Length 2001 (nucleotides) / 666 (amino acids)

Contig

Accession term accessions NZ_VXKB01000003 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_213
Orthogroup size 9
N. genomes 7

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Genomic region

Domains

PF02028 BCCT, betaine/carnitine/choline family transporter

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1292 Cell wall/membrane/envelope biogenesis (M) M Choline-glycine betaine transporter

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02168 choline/glycine/proline betaine transport protein - -

Protein Sequence

MSHQDTEQPKKNIKINPPVFFTSALIIFLIVGFAALFPQVAETHLKALQTSLFKNASWFYILAVALILMSVTYLGLSRFGDIKLGPDHARPGYSYISWFAMLFSAGMGIGLMFFGVAEPVMHYLSPPVGTPETVQAAKEAMRLTFFHWGLHAWAIYAIVALILAFFSYRHGLPLTLRSALYPIIGDRIYGPIGHAVDIFAVVGTVFGVATSLGFGVLQVNAGLNHLFGLPQTQTVQVILIVIITSLATLSVVSGLDKGIRILSELNLGLAVLLLAMVGILGPTVLLLKSFVENTGGYLSEIVSNTFNLFAYEPKSDGWLGGWTLLYWGWWLSWSPFVGMFIARISRGRTIREFVTGVLFVPAGFTLLWMTFFGNTAIDLIKNQGATELATVVKEDVSLALFQFLEYFPFSSVLSFFAMLMVIVFFVTSADSGAMVVDTLASGGDSHTPVWQRIFWAGLMGVVAITLLLAGGLSALQTVTIASALPFAAILLVSIYGLIKALRIDVHKRDSQQLATIAPTASRTPIPWQRRLRNIGYFPKRSLVKRFIDEVVSESMTSVAAELDKQGTPSRIDNSHDNRLTFEVDLGDDMNFLYETRLRHYNQPSFALSGLSDEEKDDEHRYYRAEIHLKEGGQDYDIMGWNKEQIIHDILDQYEKHIHFLHLIGKK

Flanking regions ( +/- flanking 50bp)

AGGTTCGTTGCCTGCATCCTGAATGACGTTGGGTAAAAAAGGAATAATTCATGAGTCATCAGGACACAGAACAACCTAAAAAAAATATCAAGATTAATCCGCCCGTTTTTTTCACTTCCGCGCTTATTATTTTTCTGATTGTCGGCTTTGCCGCATTATTTCCCCAGGTGGCAGAAACCCATCTGAAAGCACTACAGACAAGTCTGTTTAAAAATGCGAGCTGGTTCTACATTCTGGCGGTCGCCCTTATTTTAATGAGTGTCACTTACCTGGGATTATCCCGTTTCGGGGACATTAAACTCGGTCCCGACCATGCCCGCCCGGGATACAGTTATATCTCCTGGTTTGCCATGCTTTTTTCCGCCGGTATGGGGATTGGGCTGATGTTTTTCGGCGTGGCAGAGCCGGTGATGCACTACCTTTCGCCACCGGTCGGTACACCGGAAACGGTTCAGGCAGCAAAAGAAGCTATGCGCCTGACCTTCTTCCACTGGGGACTGCACGCCTGGGCTATTTACGCCATCGTGGCACTGATTCTGGCATTCTTCAGCTACCGCCACGGTCTGCCGCTGACACTGCGCTCCGCGCTTTATCCGATAATCGGCGACCGGATTTACGGCCCGATAGGTCATGCGGTCGATATTTTTGCGGTGGTCGGTACCGTGTTTGGTGTCGCGACTTCACTCGGCTTCGGGGTTTTACAGGTCAATGCCGGGCTGAACCATCTTTTCGGGCTGCCTCAGACACAGACTGTACAGGTGATACTCATTGTTATCATCACCTCCCTGGCAACTCTTTCCGTGGTTTCCGGGCTGGATAAAGGCATACGGATACTCTCCGAGCTTAATTTAGGGCTGGCGGTTCTGCTGCTGGCAATGGTCGGTATTTTAGGTCCGACTGTACTGCTGCTGAAATCTTTTGTGGAAAACACCGGAGGATATCTCTCCGAGATTGTCAGCAATACCTTTAATCTTTTCGCTTATGAACCTAAGTCAGATGGCTGGCTGGGCGGCTGGACCCTGCTCTACTGGGGCTGGTGGTTATCCTGGTCGCCGTTTGTCGGCATGTTTATTGCCCGTATCTCCCGCGGGCGCACCATCCGTGAATTTGTGACCGGCGTATTATTTGTTCCTGCCGGTTTTACCCTGCTGTGGATGACATTCTTTGGCAATACCGCGATTGATCTGATTAAAAATCAGGGCGCGACTGAACTTGCCACTGTGGTGAAAGAAGATGTCTCACTGGCACTGTTCCAGTTTCTGGAGTATTTCCCGTTCTCTTCCGTGCTCTCTTTCTTTGCCATGCTGATGGTTATCGTTTTCTTTGTCACCTCTGCGGACTCCGGCGCAATGGTTGTTGATACCCTGGCATCCGGTGGTGATTCGCATACACCTGTGTGGCAGCGGATTTTCTGGGCAGGATTGATGGGCGTGGTCGCGATCACACTGCTGCTGGCAGGCGGATTATCAGCGCTTCAGACGGTGACGATTGCCAGCGCCCTGCCGTTTGCCGCTATTTTGTTAGTCTCCATTTACGGGCTGATAAAAGCATTGCGGATAGACGTCCATAAACGGGACAGTCAGCAGTTAGCTACCATTGCACCGACCGCAAGCCGGACACCGATCCCATGGCAGCGCCGTTTGCGTAATATCGGCTACTTCCCGAAACGTTCACTCGTCAAACGCTTTATCGATGAAGTGGTGTCAGAATCCATGACATCCGTTGCGGCAGAACTGGATAAACAGGGAACACCGAGCCGCATTGATAACAGCCATGATAACCGGCTGACCTTTGAGGTGGATCTGGGCGATGATATGAACTTCCTGTATGAAACCCGCCTGCGTCATTACAATCAGCCCTCTTTTGCTTTATCCGGTCTGAGTGATGAAGAAAAAGATGATGAGCACCGTTACTACCGCGCTGAAATTCATCTCAAAGAAGGCGGGCAGGATTACGATATCATGGGCTGGAACAAGGAGCAGATTATTCACGATATCCTTGACCAATACGAAAAGCACATCCATTTCCTGCACTTAATCGGCAAGAAATAAACAAAACTGACGGCTGTTTTACCCGCGCCGCTACTCTCAGAGGGCAGCGG