Homologs in group_48

Help

13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07250 FBDBKF_07250 81.8 Morganella morganii S1 tyrB Aspartate/aromatic aminotransferase
FBDBKF_17040 FBDBKF_17040 40.4 Morganella morganii S1 tyrB Aspartate/aromatic aminotransferase
EHELCC_03720 EHELCC_03720 81.8 Morganella morganii S2 tyrB Aspartate/aromatic aminotransferase
EHELCC_16550 EHELCC_16550 40.4 Morganella morganii S2 tyrB Aspartate/aromatic aminotransferase
NLDBIP_03720 NLDBIP_03720 81.8 Morganella morganii S4 tyrB Aspartate/aromatic aminotransferase
NLDBIP_16760 NLDBIP_16760 40.4 Morganella morganii S4 tyrB Aspartate/aromatic aminotransferase
LHKJJB_09550 LHKJJB_09550 81.8 Morganella morganii S3 tyrB Aspartate/aromatic aminotransferase
LHKJJB_16710 LHKJJB_16710 40.4 Morganella morganii S3 tyrB Aspartate/aromatic aminotransferase
HKOGLL_09425 HKOGLL_09425 81.8 Morganella morganii S5 tyrB Aspartate/aromatic aminotransferase
HKOGLL_17675 HKOGLL_17675 40.4 Morganella morganii S5 tyrB Aspartate/aromatic aminotransferase
F4V73_RS01435 F4V73_RS01435 81.6 Morganella psychrotolerans - amino acid aminotransferase
F4V73_RS18520 F4V73_RS18520 40.4 Morganella psychrotolerans - amino acid aminotransferase
PMI_RS13520 PMI_RS13520 40.2 Proteus mirabilis HI4320 - amino acid aminotransferase

Distribution of the homologs in the orthogroup group_48

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_48

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P00509 0.0 636 75 0 396 1 aspC Aspartate aminotransferase Escherichia coli (strain K12)
Q56114 0.0 629 74 0 396 3 aspC Aspartate aminotransferase Salmonella typhi
P58661 0.0 629 74 0 396 3 aspC Aspartate aminotransferase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P44425 0.0 535 63 0 396 3 aspC Aspartate aminotransferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P28734 7.39e-133 389 48 2 398 2 None Aspartate aminotransferase, cytoplasmic Daucus carota
P72173 4.39e-132 387 48 0 396 3 aspC Aspartate aminotransferase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P37833 7.11e-129 379 46 2 398 2 Os01g0760600 Aspartate aminotransferase, cytoplasmic Oryza sativa subsp. japonica
P28011 7.54e-129 380 46 2 398 2 AAT-1 Aspartate aminotransferase 1 Medicago sativa
P46248 1.48e-127 378 47 2 394 1 ASP5 Aspartate aminotransferase, chloroplastic Arabidopsis thaliana
P46645 1.82e-127 375 45 2 398 1 ASP2 Aspartate aminotransferase, cytoplasmic isozyme 1 Arabidopsis thaliana
P43336 2.9e-127 375 47 1 394 3 phhC Aromatic-amino-acid aminotransferase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P46644 2.09e-125 372 45 2 398 1 ASP3 Aspartate aminotransferase 3, chloroplastic Arabidopsis thaliana
Q55F21 2.03e-122 363 46 1 388 3 aatA Aspartate aminotransferase, mitochondrial Dictyostelium discoideum
P26563 7.52e-122 363 45 2 394 2 None Aspartate aminotransferase P2, mitochondrial (Fragment) Lupinus angustifolius
P95468 6.6e-120 356 45 3 386 1 tyrB Aromatic-amino-acid aminotransferase Paracoccus denitrificans
P46646 4.06e-119 354 43 2 397 2 ASP4 Aspartate aminotransferase, cytoplasmic isozyme 2 Arabidopsis thaliana
Q7SYK7 9.32e-119 354 42 2 390 2 got2a Aspartate aminotransferase, mitochondrial Danio rerio
O85746 1.79e-117 350 42 1 397 1 tyrB Tyrosine aminotransferase Klebsiella pneumoniae
Q54SF7 2.71e-117 351 45 4 395 3 aatB Aspartate aminotransferase, cytoplasmic Dictyostelium discoideum
P00506 8.91e-117 349 43 2 390 1 GOT2 Aspartate aminotransferase, mitochondrial Sus scrofa
Q28F67 1.33e-116 349 44 2 390 2 got2 Aspartate aminotransferase, mitochondrial Xenopus tropicalis
P12344 2.24e-116 348 43 2 390 1 GOT2 Aspartate aminotransferase, mitochondrial Bos taurus
P74861 4.23e-116 347 41 1 397 3 tyrB Aromatic-amino-acid aminotransferase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P12345 1.47e-115 346 43 2 390 1 GOT2 Aspartate aminotransferase, mitochondrial Oryctolagus cuniculus
P00508 8.29e-115 344 42 2 389 1 GOT2 Aspartate aminotransferase, mitochondrial Gallus gallus
P04693 1.21e-114 343 41 1 397 1 tyrB Aromatic-amino-acid aminotransferase Escherichia coli (strain K12)
P05202 2.64e-114 343 42 2 390 1 Got2 Aspartate aminotransferase, mitochondrial Mus musculus
A5A6K8 2.85e-114 342 46 5 386 2 GOT1 Aspartate aminotransferase, cytoplasmic Pan troglodytes
P17174 3.14e-114 342 46 5 386 1 GOT1 Aspartate aminotransferase, cytoplasmic Homo sapiens
P00507 6.28e-114 342 42 2 390 1 Got2 Aspartate aminotransferase, mitochondrial Rattus norvegicus
P00505 1.48e-113 341 43 2 390 1 GOT2 Aspartate aminotransferase, mitochondrial Homo sapiens
O94320 2.37e-113 341 43 3 389 3 SPBC725.01 Aspartate aminotransferase, mitochondrial Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P08907 2.41e-113 340 43 2 390 1 GOT2 Aspartate aminotransferase, mitochondrial Equus caballus
P13221 2.82e-113 340 44 4 393 1 Got1 Aspartate aminotransferase, cytoplasmic Rattus norvegicus
Q5R691 3.31e-113 340 46 5 386 2 GOT1 Aspartate aminotransferase, cytoplasmic Pongo abelii
Q4R559 7.62e-113 339 42 2 390 2 GOT2 Aspartate aminotransferase, mitochondrial Macaca fascicularis
Q5REB0 1.15e-112 339 42 2 390 2 GOT2 Aspartate aminotransferase, mitochondrial Pongo abelii
P00504 1.5e-112 338 42 4 400 1 GOT1 Aspartate aminotransferase, cytoplasmic Gallus gallus
Q02636 2.14e-112 337 44 3 380 3 tatA Tyrosine aminotransferase Rhizobium meliloti (strain 1021)
P00503 5.11e-112 337 45 5 386 1 GOT1 Aspartate aminotransferase, cytoplasmic Sus scrofa
Q4R5L1 5.57e-112 337 44 4 393 2 GOT1 Aspartate aminotransferase, cytoplasmic Macaca fascicularis
P05201 2.41e-111 335 44 4 393 1 Got1 Aspartate aminotransferase, cytoplasmic Mus musculus
P33097 1.06e-108 328 44 5 386 1 GOT1 Aspartate aminotransferase, cytoplasmic Bos taurus
P08906 5.35e-108 326 44 5 386 1 GOT1 Aspartate aminotransferase, cytoplasmic Equus caballus
P46643 1.87e-105 320 40 2 395 1 ASP1 Aspartate aminotransferase, mitochondrial Arabidopsis thaliana
P23542 2.32e-99 304 40 5 406 1 AAT2 Aspartate aminotransferase, cytoplasmic Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q22067 2.33e-96 296 38 3 395 1 got-1.2 Aspartate aminotransferase, cytoplasmic Caenorhabditis elegans
O42652 4.8e-96 296 39 4 397 1 aat2 Aspartate aminotransferase, cytoplasmic Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q01802 1.6e-79 254 34 10 432 1 AAT1 Aspartate aminotransferase, mitochondrial Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
A0A0C1E1D0 1.08e-75 246 35 8 398 1 ucdG L-tyrosine:2-oxoglutarate aminotransferase ucdG Aspergillus ustus
A0A0F7CUE9 1.88e-54 186 28 3 398 3 tasG Aminotransferase tasG Hapsidospora irregularis
Q2T9S8 1.03e-53 186 31 5 376 2 GOT1L1 Putative aspartate aminotransferase, cytoplasmic 2 Bos taurus
Q8NHS2 9.77e-48 171 30 5 383 1 GOT1L1 Putative aspartate aminotransferase, cytoplasmic 2 Homo sapiens
Q7TSV6 9.86e-44 159 29 4 380 2 Got1l1 Putative aspartate aminotransferase, cytoplasmic 2 Mus musculus
Q970Z4 0.000159 47 24 13 280 3 hisC Histidinol-phosphate aminotransferase Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03755
Feature type CDS
Gene -
Product amino acid aminotransferase
Location 847182 - 848372 (strand: -1)
Length 1191 (nucleotides) / 396 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_48
Orthogroup size 14
N. genomes 7

Actions

Genomic region

Domains

PF00155 Aminotransferase class I and II

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1448 Amino acid transport and metabolism (E) E Aspartate/aromatic aminotransferase

Kegg Ortholog Annotation(s)

Protein Sequence

MFEKIIAAPADPILGLADSFRSDTRENKINLGIGVYKDETGKTPVLTTVKKAEKYLLENESTKNYLPISGIPEFGAVTQALLFGEQHPIITEKRARTAQAPGGTGALRIAADFIAQQTNAKRVWISNPTWPNHNNIFQTAGLEICQYDYYDAESHGLDFEGMLASLQNAQAGDVVLFHGCCHNPSGIDPTLEQWRQLAALSAEKGWLPVFDFAYQGFANGLEEDAQGLRLFAESNPELIVASSYSKNFGLYNERVGACTIVAKESDTAEKAFSQAKAIIRANYSNPPAHGASVVTTILSNPELKEEWIEELTTMRERIQRMRQLLVTTLQEKGAKQDFSFIIDQNGMFSFSGLNKEQVERLRAEYGIYIVGSGRINVAGLTLENMVPLCEAIVAVL

Flanking regions ( +/- flanking 50bp)

CTTGTTACTCATAATTCGGCTTCGTTTTGAGCTTAGGGAATAATTACACTATGTTTGAGAAAATCATTGCTGCACCAGCCGATCCTATTCTGGGTTTAGCTGATAGTTTCCGTTCTGATACTCGTGAAAACAAAATTAACTTAGGGATTGGTGTTTATAAGGATGAAACAGGTAAAACACCTGTACTCACCACCGTTAAAAAAGCAGAAAAATATTTATTAGAAAACGAATCCACTAAAAATTATCTTCCTATTAGCGGTATTCCTGAGTTTGGTGCGGTCACTCAAGCACTGTTGTTTGGTGAACAACACCCTATCATCACAGAAAAACGTGCACGTACAGCACAAGCTCCGGGTGGTACTGGGGCATTACGTATTGCTGCGGACTTTATTGCTCAGCAAACTAATGCTAAACGTGTATGGATAAGTAACCCGACTTGGCCAAACCATAATAATATTTTTCAGACTGCAGGCTTAGAGATTTGCCAATATGATTATTATGATGCCGAAAGCCACGGTTTAGATTTTGAAGGTATGCTAGCTAGCCTACAAAATGCACAAGCAGGTGATGTTGTGCTGTTCCACGGATGTTGCCATAACCCAAGTGGTATTGACCCAACGTTAGAGCAATGGCGTCAATTGGCTGCCTTATCCGCAGAGAAAGGTTGGTTACCAGTATTTGACTTTGCTTACCAAGGTTTTGCTAATGGCCTTGAAGAAGACGCGCAAGGCTTACGCCTATTTGCTGAAAGCAATCCTGAGCTGATTGTTGCAAGCTCATATTCAAAAAACTTTGGCCTTTATAATGAGCGTGTAGGTGCTTGCACTATTGTCGCAAAAGAGAGCGATACTGCTGAGAAAGCATTTAGCCAAGCCAAAGCGATTATTCGCGCAAACTACTCTAATCCACCGGCACATGGTGCATCTGTGGTGACCACTATTTTATCTAACCCAGAGTTAAAAGAAGAGTGGATTGAAGAGCTCACCACAATGCGTGAGCGCATTCAGCGTATGCGTCAATTGCTGGTGACAACCTTACAAGAAAAAGGCGCAAAACAAGATTTCAGCTTTATTATTGACCAAAATGGTATGTTCTCATTTAGTGGCCTTAATAAAGAGCAAGTTGAACGTCTACGTGCTGAATATGGTATTTATATTGTCGGCTCTGGTCGTATTAATGTCGCAGGCTTAACACTGGAAAATATGGTTCCATTGTGTGAAGCCATTGTCGCTGTACTTTAATGGCTTTTTCATCGTTTTAAAGCATACAGTTAAATAACACGTTTTATAAC