COG1448


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1448, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 14 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Aspartate/aromatic aminotransferase
Function(s) descr. Amino acid transport and metabolism (E)

Occurence in the database

COG1448 is associated with 14 different proteins (see tab "Protein list" and "Profile")
The 14 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_48 FBDBKF_07250 127433 128623 -1 tyrB Aspartate/aromatic aminotransferase Morganella morganii S1
1 group_48 FBDBKF_17040 39762 40958 -1 tyrB Aspartate/aromatic aminotransferase Morganella morganii S1
2 group_48 EHELCC_03720 57563 58753 1 tyrB Aspartate/aromatic aminotransferase Morganella morganii S2
3 group_48 EHELCC_16550 27552 28748 1 tyrB Aspartate/aromatic aminotransferase Morganella morganii S2
4 group_48 NLDBIP_03720 57359 58549 1 tyrB Aspartate/aromatic aminotransferase Morganella morganii S4
5 group_48 NLDBIP_16760 27552 28748 1 tyrB Aspartate/aromatic aminotransferase Morganella morganii S4
6 group_48 LHKJJB_09550 57473 58663 1 tyrB Aspartate/aromatic aminotransferase Morganella morganii S3
7 group_48 LHKJJB_16710 39762 40958 -1 tyrB Aspartate/aromatic aminotransferase Morganella morganii S3
8 group_48 HKOGLL_09425 132389 133579 -1 tyrB Aspartate/aromatic aminotransferase Morganella morganii S5
9 group_48 HKOGLL_17675 39762 40958 -1 tyrB Aspartate/aromatic aminotransferase Morganella morganii S5
10 group_48 F4V73_RS01435 315495 316685 -1 amino acid aminotransferase Morganella psychrotolerans
11 group_48 F4V73_RS18520 40682 41878 -1 amino acid aminotransferase Morganella psychrotolerans
12 group_48 PMI_RS03755 847182 848372 -1 amino acid aminotransferase Proteus mirabilis HI4320
13 group_48 PMI_RS13520 2996461 2997654 1 amino acid aminotransferase Proteus mirabilis HI4320