Homologs in group_1208

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07015 FBDBKF_07015 74.2 Morganella morganii S1 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain
EHELCC_03955 EHELCC_03955 74.2 Morganella morganii S2 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain
NLDBIP_03955 NLDBIP_03955 74.2 Morganella morganii S4 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain
LHKJJB_09785 LHKJJB_09785 74.2 Morganella morganii S3 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain
HKOGLL_09190 HKOGLL_09190 74.2 Morganella morganii S5 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain
F4V73_RS01205 F4V73_RS01205 73.8 Morganella psychrotolerans artJ arginine ABC transporter substrate-binding protein

Distribution of the homologs in the orthogroup group_1208

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1208

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P30859 7.31e-130 369 71 1 244 1 artI Putative ABC transporter arginine-binding protein 2 Escherichia coli (strain K12)
P30860 4.75e-116 334 64 1 243 1 artJ ABC transporter arginine-binding protein 1 Escherichia coli (strain K12)
P45091 1.27e-80 244 48 3 243 1 artI ABC transporter arginine-binding protein Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P49618 4.66e-72 223 48 4 242 3 lapT Arginine-binding periplasmic protein Mannheimia haemolytica
G3XD47 1.45e-54 179 39 6 238 1 aotJ L-arginine-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P02910 2.82e-54 178 41 4 231 1 hisJ Histidine-binding periplasmic protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P09551 9.58e-54 177 37 4 252 1 argT Lysine/arginine/ornithine-binding periplasmic protein Escherichia coli (strain K12)
P0AEU0 4.08e-53 175 41 4 231 1 hisJ Histidine-binding periplasmic protein Escherichia coli (strain K12)
P0AEU1 4.08e-53 175 41 4 231 3 hisJ Histidine-binding periplasmic protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AEU2 4.08e-53 175 41 4 231 3 hisJ Histidine-binding periplasmic protein Escherichia coli O157:H7
P02911 1.41e-51 171 37 6 256 1 argT Lysine/arginine/ornithine-binding periplasmic protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P35120 2e-45 156 32 5 272 1 nocT Nopaline-binding periplasmic protein Agrobacterium fabrum (strain C58 / ATCC 33970)
P0AEQ3 5.46e-36 130 34 8 248 1 glnH Glutamine-binding periplasmic protein Escherichia coli (strain K12)
P0AEQ4 5.46e-36 130 34 8 248 3 glnH Glutamine-binding periplasmic protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AEQ5 5.46e-36 130 34 8 248 3 glnH Glutamine-binding periplasmic protein Escherichia coli O157:H7
P54535 2.29e-35 129 36 8 258 1 artP Arginine-binding extracellular protein ArtP Bacillus subtilis (strain 168)
Q06758 1.28e-34 127 34 5 233 3 hisJ Probable histidine-binding protein Neisseria gonorrhoeae
P0A4F8 1.93e-33 125 29 8 274 1 occT Octopine-binding periplasmic protein Rhizobium radiobacter
P0A4F9 1.93e-33 125 29 8 274 3 occT Octopine-binding periplasmic protein Agrobacterium tumefaciens (strain Ach5)
Q9Z869 1.77e-29 114 29 5 246 1 artJ Probable ABC transporter arginine-binding protein ArtJ Chlamydia pneumoniae
P0AEM9 4.19e-29 113 29 4 228 1 tcyJ L-cystine-binding protein TcyJ Escherichia coli (strain K12)
P0AEN0 4.19e-29 113 29 4 228 3 tcyJ L-cystine-binding protein TcyJ Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P72298 9.34e-28 110 26 7 291 3 occT Octopine-binding periplasmic protein Rhizobium meliloti
O34563 6.86e-27 107 32 4 209 2 glnH ABC transporter glutamine-binding protein GlnH Bacillus subtilis (strain 168)
Q46125 3.45e-25 102 32 7 225 1 hisJ Probable histidine-binding protein Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
O84385 1.02e-22 96 26 5 247 1 artJ Probable ABC transporter arginine-binding protein ArtJ Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
P39906 1.19e-21 93 32 10 255 3 aabA Amino-acid-binding protein AabA Dichelobacter nodosus
P45024 3e-21 92 28 8 261 1 HI_1080 Probable amino-acid ABC transporter-binding protein HI_1080 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P42199 9.4e-19 85 27 7 235 1 tcyA L-cystine-binding protein TcyA Bacillus subtilis (strain 168)
P54952 3.78e-14 73 24 6 233 1 yxeM Probable amino-acid-binding protein YxeM Bacillus subtilis (strain 168)
P42400 3.32e-13 70 25 5 231 1 yckB Probable ABC transporter extracellular-binding protein YckB Bacillus subtilis (strain 168)
Q8ZPA3 1.18e-12 68 21 2 185 1 dalS ABC transporter D-alanine-binding periplasmic protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P27676 5.14e-11 64 27 4 170 3 glnH Glutamine-binding protein Geobacillus stearothermophilus
P52626 1.5e-10 62 24 6 223 3 patH Putative amino-acid ABC transporter-binding protein PatH Vibrio harveyi
P37902 1.92e-10 63 25 5 225 1 gltI Glutamate/aspartate import solute-binding protein Escherichia coli (strain K12)
Q9ZF60 5.2e-10 62 24 5 225 3 gltI Glutamate/aspartate import solute-binding protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q01269 5.3e-10 61 25 1 174 1 pheC Cyclohexadienyl dehydratase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9I402 2.25e-09 60 29 5 156 1 PA1342 L-glutamate/L-aspartate-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A8ZWR8 1.11e-08 58 23 3 205 3 mltF Membrane-bound lytic murein transglycosylase F Desulfosudis oleivorans (strain DSM 6200 / JCM 39069 / Hxd3)
O34852 1.13e-08 57 24 6 250 1 tcyK L-cystine-binding protein TcyK Bacillus subtilis (strain 168)
Q0P9X8 4.59e-08 55 25 4 166 1 peb1A Major cell-binding factor Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
A1VZQ4 1.12e-07 54 25 4 166 3 peb1A Major cell-binding factor Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176)
Q8NQU2 1.13e-07 55 23 7 223 1 argT Arginine-binding protein ArgT Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q02482 1.81e-07 55 21 5 225 3 Sfri_3689 Putative sensor protein Sfri_3689 Shewanella frigidimarina (strain NCIMB 400)
P55659 2.14e-06 51 26 9 242 3 NGR_a01540 Probable amino-acid ABC transporter periplasmic-binding protein y4tE Sinorhizobium fredii (strain NBRC 101917 / NGR234)
O34406 5.83e-06 49 20 6 251 1 tcyJ L-cystine-binding protein TcyJ Bacillus subtilis (strain 168)
Q0AQY9 7.17e-05 47 22 6 205 3 mltF Membrane-bound lytic murein transglycosylase F Maricaulis maris (strain MCS10)
A4SNZ5 0.000617 44 25 4 152 3 mltF Membrane-bound lytic murein transglycosylase F Aeromonas salmonicida (strain A449)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03350
Feature type CDS
Gene artJ
Product arginine ABC transporter substrate-binding protein
Location 738962 - 739696 (strand: -1)
Length 735 (nucleotides) / 244 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1208
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00497 Bacterial extracellular solute-binding proteins, family 3

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0834 Amino acid transport and metabolism (E)
Signal transduction mechanisms (T)		 ET ABC-type amino acid transport/signal transduction system, periplasmic component/domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09997 arginine transport system substrate-binding protein ABC transporters -

Protein Sequence

MKKILFAALLTSITLSATAADKETIRFATEATYPPFEMIDANNQIVGFDVDLANAMCEKINAECTFTNQSFDSLIPSLKFRRFDALMAGIDITPERQKQVDFTDSYYDNSAVFITVTGKISDVASLKGKQIGVQNGTTHQKFINEQHKEMKTVPYDSYQNAVLDLKNGRIEAIFGDTAVVNEWLKKNPELGIVGDKVTDPNYFGTGLAIAVRKGNADLQDKLNKALSEVKADGTYDVIYKKWFE

Flanking regions ( +/- flanking 50bp)

CAAACGGAAGCTTTTGCTAATTACTTGTCACACTAAATCGGGATCTGACAATGAAAAAAATATTATTTGCAGCACTTCTGACCAGTATTACACTTTCTGCAACAGCGGCTGATAAAGAGACTATTCGTTTTGCTACTGAGGCAACTTATCCTCCATTTGAAATGATTGATGCAAACAATCAAATCGTTGGTTTTGATGTAGATTTAGCAAATGCCATGTGTGAAAAAATTAATGCTGAATGTACTTTTACCAATCAATCATTTGATAGCTTAATTCCTAGCTTAAAATTCCGTCGTTTTGACGCATTAATGGCGGGGATTGATATTACGCCTGAGCGTCAAAAACAGGTAGATTTTACTGATTCTTACTATGACAACTCAGCGGTCTTTATCACCGTTACAGGTAAAATTTCCGATGTTGCAAGCTTAAAAGGCAAGCAAATTGGTGTCCAAAATGGGACAACCCATCAGAAATTCATCAATGAACAACATAAAGAGATGAAAACGGTGCCTTATGACAGTTACCAAAATGCCGTGTTAGACCTAAAAAATGGTCGTATCGAGGCTATCTTTGGTGATACCGCTGTGGTTAATGAATGGCTGAAAAAGAATCCTGAATTAGGCATTGTCGGTGATAAGGTCACTGATCCTAACTATTTTGGTACAGGCCTTGCTATTGCAGTAAGAAAAGGTAATGCTGATTTACAAGATAAATTAAACAAAGCATTATCTGAAGTAAAAGCCGATGGCACCTATGATGTCATTTATAAAAAATGGTTTGAATAATTATAGTTAATAACAACAATAGCTTAATAAATGAATGAAATAACAACGCT