Homologs in group_1231

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06725 FBDBKF_06725 68.6 Morganella morganii S1 rhtA threonine/homoserine exporter RhtA
EHELCC_04245 EHELCC_04245 68.6 Morganella morganii S2 rhtA threonine/homoserine exporter RhtA
NLDBIP_04245 NLDBIP_04245 68.6 Morganella morganii S4 rhtA threonine/homoserine exporter RhtA
LHKJJB_10075 LHKJJB_10075 68.6 Morganella morganii S3 rhtA threonine/homoserine exporter RhtA
HKOGLL_08900 HKOGLL_08900 68.6 Morganella morganii S5 rhtA threonine/homoserine exporter RhtA
F4V73_RS00880 F4V73_RS00880 70.3 Morganella psychrotolerans rhtA threonine/homoserine exporter RhtA

Distribution of the homologs in the orthogroup group_1231

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1231

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AA67 6.97e-121 351 61 1 288 1 rhtA Threonine/homoserine exporter RhtA Escherichia coli (strain K12)
P0AA68 6.97e-121 351 61 1 288 3 rhtA Threonine/homoserine exporter RhtA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA69 6.97e-121 351 61 1 288 3 rhtA Threonine/homoserine exporter RhtA Escherichia coli O157:H7
P0CL04 9.28e-117 340 62 1 290 3 rhtA Threonine/homoserine exporter RhtA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
E1W9W8 9.28e-117 340 62 1 290 3 rhtA Threonine/homoserine exporter RhtA Salmonella typhimurium (strain SL1344)
P39649 7.91e-08 56 28 11 273 3 ywfM Uncharacterized transporter YwfM Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS03115
Feature type CDS
Gene rhtA
Product threonine/homoserine exporter RhtA
Location 687390 - 688280 (strand: -1)
Length 891 (nucleotides) / 296 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1231
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00892 EamA-like transporter family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5006 Amino acid transport and metabolism (E) E Threonine/homoserine efflux transporter RhtA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K11939 inner membrane transporter RhtA - -

Protein Sequence

MLSARHSAKLQVFYPVLLLLLSMLSIQSGASLAKSLFPVIGAPAVTALRLFLGTLILFFIFKPWRLSFSRSAIMPLFLYGLSLGAMNYLFYLALETIPLGIAVALEFTGPLAVAMFSSRRAIDFLWIILVIAGLGLLLPIGDNIHGLDPLGILYALGAGVGWALYIVFGQRAGKGYGAATVSIGSLIAAFIFFPIGMLQSSPELVFSWSILPIGLAIAILSTAFPYTLEMIALTRLPAKTFGTLMSLEPCMGAFIGIIFLHEHLTLIQWVALAFIVLASIGSTATMKRKTKIEKVE

Flanking regions ( +/- flanking 50bp)

TATAGGATAACAGAGTACTCAACGCTTTACTTTTGACGAGGTTTTTCAGGATGTTGTCAGCCAGACACTCAGCTAAATTACAGGTGTTCTACCCTGTGCTTCTTTTGCTTCTTTCTATGCTATCAATACAAAGTGGCGCATCATTGGCAAAAAGCCTGTTTCCTGTTATTGGCGCCCCCGCAGTCACAGCATTACGCCTTTTTCTAGGTACTCTGATCCTGTTTTTTATTTTTAAACCATGGCGTCTAAGCTTTTCTCGTAGTGCCATAATGCCACTATTTTTATATGGTTTATCATTAGGGGCAATGAACTACTTATTCTACTTGGCTCTTGAAACTATTCCATTAGGTATTGCAGTAGCACTTGAGTTTACGGGACCGCTTGCGGTAGCGATGTTTTCTTCACGCAGAGCAATCGATTTTTTATGGATAATCTTAGTGATTGCTGGATTAGGGTTATTACTGCCGATTGGGGATAATATTCACGGACTCGATCCCCTAGGCATTTTATATGCATTAGGTGCGGGTGTCGGTTGGGCACTGTATATTGTTTTCGGACAACGTGCAGGAAAAGGCTATGGCGCAGCGACAGTTTCTATTGGCTCACTTATTGCCGCCTTTATCTTTTTCCCTATTGGTATGCTACAAAGTAGCCCTGAGCTAGTTTTTAGTTGGTCTATATTACCTATTGGATTAGCTATTGCGATTTTATCTACCGCTTTTCCTTATACTTTGGAAATGATTGCACTTACCCGTTTACCGGCAAAAACCTTTGGGACATTGATGAGTTTAGAGCCTTGTATGGGGGCTTTTATTGGTATTATTTTCTTACATGAACATTTAACGTTAATACAATGGGTTGCGTTGGCATTTATTGTGTTAGCGTCGATTGGTTCCACTGCAACCATGAAAAGAAAAACCAAAATTGAAAAAGTAGAATAAATATTTATACAGTTTAACTTATTAATAAATAAAATATTAAATGAAAAGAG