Orthogroup:group_1231


Homologs in group_1231

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_07170 FBDBKF_07170 Morganella morganii S1 comEC DNA internalization-related competence protein ComEC/Rec2
EHELCC_03800 EHELCC_03800 Morganella morganii S2 comEC DNA internalization-related competence protein ComEC/Rec2
NLDBIP_03800 NLDBIP_03800 Morganella morganii S4 comEC DNA internalization-related competence protein ComEC/Rec2
LHKJJB_09630 LHKJJB_09630 Morganella morganii S3 comEC DNA internalization-related competence protein ComEC/Rec2
HKOGLL_09345 HKOGLL_09345 Morganella morganii S5 comEC DNA internalization-related competence protein ComEC/Rec2
F4V73_RS01355 F4V73_RS01355 Morganella psychrotolerans - DNA internalization-related competence protein ComEC/Rec2
PMI_RS03525 PMI_RS03525 Proteus mirabilis HI4320 - DNA internalization-related competence protein ComEC/Rec2

Distribution of group_1231 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_1231 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1231

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_1231.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 comEC 5
2 - 2

Product

# Product Occurence
1 DNA internalization-related competence protein ComEC/Rec2 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG2333 7 U Intracellular trafficking, secretion, and vesicular transport (U) DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K02238 7 competence protein ComEC - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00753 7 Metallo-beta-lactamase superfamily
PF03772 7 Competence protein
PF13567 1 Domain of unknown function (DUF4131)

Annotations of the 13 SwissProt hits

Annotation Number of occurrences
ComE operon protein 3 1
Competence protein ComA 1
Hydroxyacylglutathione hydrolase 7
Hydroxyacylglutathione hydrolase 2 1
Recombination protein 2 1
Uncharacterized protein YcaI 1
Uncharacterized protein aq_1618 1

Protein length

Min length 766
Max length 789
Mean length (sd) 770.6 (8.8)
Median length 766.0

Protein length distribution