Homologs in group_1231

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06725 FBDBKF_06725 85.3 Morganella morganii S1 rhtA threonine/homoserine exporter RhtA
EHELCC_04245 EHELCC_04245 85.3 Morganella morganii S2 rhtA threonine/homoserine exporter RhtA
NLDBIP_04245 NLDBIP_04245 85.3 Morganella morganii S4 rhtA threonine/homoserine exporter RhtA
LHKJJB_10075 LHKJJB_10075 85.3 Morganella morganii S3 rhtA threonine/homoserine exporter RhtA
HKOGLL_08900 HKOGLL_08900 85.3 Morganella morganii S5 rhtA threonine/homoserine exporter RhtA
PMI_RS03115 PMI_RS03115 70.3 Proteus mirabilis HI4320 rhtA threonine/homoserine exporter RhtA

Distribution of the homologs in the orthogroup group_1231

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1231

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AA67 3.62e-119 347 63 2 287 1 rhtA Threonine/homoserine exporter RhtA Escherichia coli (strain K12)
P0AA68 3.62e-119 347 63 2 287 3 rhtA Threonine/homoserine exporter RhtA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AA69 3.62e-119 347 63 2 287 3 rhtA Threonine/homoserine exporter RhtA Escherichia coli O157:H7
P0CL04 2.92e-112 329 62 2 287 3 rhtA Threonine/homoserine exporter RhtA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
E1W9W8 2.92e-112 329 62 2 287 3 rhtA Threonine/homoserine exporter RhtA Salmonella typhimurium (strain SL1344)
P39649 1.17e-05 49 30 6 164 3 ywfM Uncharacterized transporter YwfM Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00880
Feature type CDS
Gene rhtA
Product threonine/homoserine exporter RhtA
Location 184915 - 185814 (strand: -1)
Length 900 (nucleotides) / 299 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1231
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00892 EamA-like transporter family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5006 Amino acid transport and metabolism (E) E Threonine/homoserine efflux transporter RhtA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K11939 inner membrane transporter RhtA - -

Protein Sequence

MSASPRQHGGSPWLPIGLLLLSMVSIQSGASLAKTLFPVIGAPGVTALRLLLGTAILFIIFKPWRLSFTRASVLPILGYGISLGIMNYLFYLALTTIPLGIAVALEFTGPLAVAMFGARRPADFFWIVLVITGLAFLLPIGDQLGELEQLDPIGMLYALGAGAGWALYIIFGQRAGKFYGAATVSLGSLIAALIFFPLGALNSDISVMFSWAVLPLGLAIAILSTAFPYSLEMVALTRLPTRTFGTLMSLEPVVGAMVGITFLHEHLTFTQWLALTCIVIASMGAALTIKPKSKIKKIK

Flanking regions ( +/- flanking 50bp)

CAATCTCTGTGTCATCATCCGCATTTTTCTTATTATTCCCGAGGTTCTTCATGTCTGCGTCTCCCCGTCAGCACGGTGGTTCTCCGTGGTTACCTATTGGCTTATTACTGCTGTCCATGGTGTCTATCCAGAGTGGTGCGTCGCTGGCAAAAACGCTTTTTCCGGTGATTGGCGCTCCGGGCGTTACAGCGCTGCGGCTGCTGTTAGGGACGGCCATCCTATTTATTATTTTTAAACCCTGGCGGCTCAGTTTTACGCGGGCATCGGTTCTGCCGATATTAGGCTACGGGATCTCTCTCGGGATAATGAATTACCTTTTTTACCTGGCGCTGACCACTATTCCGCTGGGGATTGCCGTCGCACTGGAATTTACCGGACCACTGGCGGTTGCTATGTTTGGCGCCCGCCGTCCGGCGGATTTTTTCTGGATTGTGCTGGTGATAACCGGGCTGGCTTTTTTATTACCGATAGGTGACCAGTTGGGAGAACTTGAGCAACTTGACCCTATAGGAATGCTTTACGCACTTGGCGCAGGGGCGGGCTGGGCGCTCTACATTATTTTCGGGCAGCGCGCCGGAAAATTCTATGGCGCGGCAACGGTTTCTCTGGGCTCCCTTATCGCGGCACTTATTTTTTTCCCGCTTGGTGCATTAAACAGTGATATCAGTGTAATGTTCAGCTGGGCGGTACTGCCGCTGGGGCTGGCGATCGCCATTTTGTCGACGGCTTTCCCGTATTCGCTGGAGATGGTTGCATTAACCCGGCTGCCGACCCGGACATTCGGGACATTAATGAGCCTGGAGCCGGTGGTGGGTGCGATGGTGGGTATTACATTCCTGCATGAACACCTGACCTTTACACAATGGCTGGCGCTGACCTGCATTGTTATTGCCTCCATGGGGGCGGCGCTTACTATTAAACCAAAATCCAAAATCAAAAAAATAAAATAATCATCTCTCCATATTATATACCGGCCTCGTGCCGGTTTTCACCATACACA