Homologs in group_213

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13810 FBDBKF_13810 82.0 Morganella morganii S1 betT Choline-glycine betaine transporter
EHELCC_11480 EHELCC_11480 82.0 Morganella morganii S2 betT Choline-glycine betaine transporter
NLDBIP_11825 NLDBIP_11825 82.0 Morganella morganii S4 betT Choline-glycine betaine transporter
LHKJJB_11685 LHKJJB_11685 82.0 Morganella morganii S3 betT Choline-glycine betaine transporter
HKOGLL_10295 HKOGLL_10295 82.0 Morganella morganii S5 betT Choline-glycine betaine transporter
F4V73_RS12675 F4V73_RS12675 81.7 Morganella psychrotolerans betT choline BCCT transporter BetT
PMI_RS07075 PMI_RS07075 43.7 Proteus mirabilis HI4320 - choline transporter
PMI_RS13075 PMI_RS13075 27.6 Proteus mirabilis HI4320 caiT L-carnitine/gamma-butyrobetaine antiporter

Distribution of the homologs in the orthogroup group_213

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_213

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q6F754 0.0 657 50 7 652 1 ACIAD3460 Glycine betaine transporter Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
G3XCN6 0.0 631 49 5 652 1 betS Glycine betaine/proline betaine transporter BetS Rhizobium meliloti
P0ABC9 0.0 565 43 7 669 1 betT High-affinity choline transport protein Escherichia coli (strain K12)
P0ABD0 0.0 565 43 7 669 3 betT High-affinity choline transport protein Escherichia coli O157:H7
Q6FDF5 0.0 561 41 5 670 1 betT2 Osmo-dependent choline transporter BetT2 Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P45335 7.22e-164 488 40 10 664 3 HI_1706 Uncharacterized transporter HI_1706 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A0A0B5RUB0 1.94e-163 482 49 2 491 2 tmaT Trimethylamine transporter Myroides profundi
Q6FDF6 5.77e-146 437 43 2 507 1 betT1 Osmo-independent choline transporter BetT1 Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
Q87NZ5 8.16e-142 428 43 5 521 1 VP1723 Glycine betaine/proline/choline transporter VP1723 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q9X4A5 5.36e-141 424 44 4 506 1 betL Glycine betaine transporter BetL Listeria monocytogenes
P54417 2.95e-140 422 46 5 468 1 opuD Glycine betaine transporter OpuD Bacillus subtilis (strain 168)
Q24SP9 4.06e-139 419 42 3 494 2 DSY3154 Probable glycine betaine transporter Desulfitobacterium hafniense (strain Y51)
P63696 4.77e-133 407 46 5 499 3 BQ2027_MB0941 Uncharacterized transporter Mb0941 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WPR7 4.77e-133 407 46 5 499 3 Rv0917 Uncharacterized transporter Rv0917 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WPR6 4.77e-133 407 46 5 499 3 MT0942 Uncharacterized transporter MT0942 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q87PP5 1.99e-126 389 41 7 512 1 VP1456 Glycine betaine/proline/choline/ectoine transporter VP1456 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q87NG3 2.29e-125 384 43 7 510 1 VP1905 Glycine betaine transporter 1 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q79VE0 2.3e-117 367 35 8 584 1 ectP Ectoine/glycine betaine/proline transporter EctP Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q93AK1 1.25e-111 348 39 6 507 1 ectT Ectoine/hydroxyectoine transporter Virgibacillus pantothenticus
P54582 4.23e-106 337 37 12 551 1 betP Glycine betaine transporter BetP Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q8NN75 2.43e-94 307 35 7 508 1 lcoP Betaine/ectoine transporter LcoP Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q87J97 9.84e-63 221 29 11 493 1 VPA0356 Glycine betaine transporter 2 Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
P0ABD1 3.83e-49 182 30 12 473 3 yeaV Uncharacterized transporter YeaV Escherichia coli (strain K12)
P0ABD2 3.83e-49 182 30 12 473 3 yeaV Uncharacterized transporter YeaV Escherichia coli O157:H7
A9MQH4 7.47e-47 176 28 10 502 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
D0C9N4 3.08e-46 175 27 9 447 3 HMPREF0010_01347 Carnitine transporter Acinetobacter baumannii (strain ATCC 19606 / DSM 30007 / JCM 6841 / CCUG 19606 / CIP 70.34 / NBRC 109757 / NCIMB 12457 / NCTC 12156 / 81)
B7MNP7 5.37e-46 174 28 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O81 (strain ED1a)
B5BL58 7.07e-46 173 27 10 507 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella paratyphi A (strain AKU_12601)
Q5PIN5 7.07e-46 173 27 10 507 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q8ZRX1 7.65e-46 173 27 10 507 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TWR7 7.65e-46 173 27 10 507 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella schwarzengrund (strain CVM19633)
C0Q4L6 7.65e-46 173 27 10 507 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella paratyphi C (strain RKS4594)
A9MYK0 7.65e-46 173 27 10 507 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B4T6J9 7.65e-46 173 27 10 507 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella newport (strain SL254)
B4TIH3 7.65e-46 173 27 10 507 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella heidelberg (strain SL476)
B5R1R3 7.65e-46 173 27 10 507 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella enteritidis PT4 (strain P125109)
B5FHG8 7.65e-46 173 27 10 507 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella dublin (strain CT_02021853)
B5F753 7.65e-46 173 27 10 507 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella agona (strain SL483)
Q57TI7 1.33e-45 172 27 10 507 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella choleraesuis (strain SC-B67)
A8ALR3 1.67e-45 172 27 10 507 3 caiT L-carnitine/gamma-butyrobetaine antiporter Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
B5RGA7 2.09e-45 172 27 10 507 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella gallinarum (strain 287/91 / NCTC 13346)
P59333 2.23e-45 172 28 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TLU9 2.23e-45 172 28 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7UI86 2.23e-45 172 28 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q8Z9L1 2.33e-45 172 27 10 507 3 caiT L-carnitine/gamma-butyrobetaine antiporter Salmonella typhi
B7M0D7 2.58e-45 172 28 11 499 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O8 (strain IAI1)
Q3Z5W8 4.57e-45 171 28 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Shigella sonnei (strain Ss046)
Q1RGF8 4.57e-45 171 28 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain UTI89 / UPEC)
B7N7R5 4.57e-45 171 28 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P31553 4.57e-45 171 28 12 504 1 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain K12)
A1A790 4.57e-45 171 28 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O1:K1 / APEC
A7ZVZ0 4.57e-45 171 28 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O9:H4 (strain HS)
B1XBG5 4.57e-45 171 28 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain K12 / DH10B)
C4ZPW6 4.57e-45 171 28 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain K12 / MC4100 / BW2952)
B7L4G3 4.57e-45 171 28 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain 55989 / EAEC)
B7MAG3 4.57e-45 171 28 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O45:K1 (strain S88 / ExPEC)
A7ZHD1 4.57e-45 171 28 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O139:H28 (strain E24377A / ETEC)
B4EY22 6.97e-45 171 27 13 530 1 caiT L-carnitine/gamma-butyrobetaine antiporter Proteus mirabilis (strain HI4320)
B1LFX3 7.06e-45 171 28 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain SMS-3-5 / SECEC)
B1IRD6 7.06e-45 171 28 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
B7NHE4 7.06e-45 171 28 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B6HYZ1 1.31e-44 170 27 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli (strain SE11)
P59335 4.81e-44 168 27 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Shigella flexneri
P59334 5.2e-44 168 27 11 516 3 caiT L-carnitine/gamma-butyrobetaine antiporter Proteus sp. (strain LE138)
B7LWN1 5.74e-44 168 27 12 507 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q0T8F4 1.59e-43 167 28 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Shigella flexneri serotype 5b (strain 8401)
B5YYD4 3.23e-43 166 27 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XA30 3.23e-43 166 27 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Escherichia coli O157:H7
Q32K57 4.21e-43 166 28 12 504 3 caiT L-carnitine/gamma-butyrobetaine antiporter Shigella dysenteriae serotype 1 (strain Sd197)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01210
Feature type CDS
Gene betT
Product choline BCCT transporter BetT
Location 296280 - 298283 (strand: -1)
Length 2004 (nucleotides) / 667 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_213
Orthogroup size 9
N. genomes 7

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Genomic region

Domains

PF02028 BCCT, betaine/carnitine/choline family transporter

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1292 Cell wall/membrane/envelope biogenesis (M) M Choline-glycine betaine transporter

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02168 choline/glycine/proline betaine transport protein - -

Protein Sequence

MSQQNEITPKKIRMKINPPVFYTSAILIMLVVGFSALFPELANDKLGHLQENLFTNASWFYILAVALVLLSVTYLGLSRFGEIKLGPDHARPHFSYFAWFAMLFSAGMGIGLMFFGVAEPVMHYLMPPTGDAQTIEAAKEAMRLTFFHWGLHAWAIYAIVALILAFFSYRHGLPLTLRSALYPIIGDRIYGPIGHAVDIFAVMGTVFGVATSLGFGVLQVNAGLNHLFDIPINPTVQVVLIVVITGLATISVVSGLEKGIRFLSELNLGLAVILLLLVIILGPTVLILKSFVENTGGYLSEIVSKTFNLYAYEPKSSDWLGGWTLLYWGWWLSWSPFVGMFIARISRGRTIREFVVGVLFVPAGFTLLWMTVFGNTAIYLIKDKGAEVLANIVQQDVSLALFEFLNYFPFSSVLSFVAMLMVIVFFVTSADSGAMVVDTLASGGDSETPVWQRIFWAALMGISAITLLLAGGLSALQTVTIASALPFAIVLLASIYGLIKALRVDVYKRDSQQMTTIAPPASRNPIPWQRRLRNIAYFPKRSHVKRFMEEVVNPSMEMVSAELSKQGIQCYIHDEEEDRIGFEVDLGEDMNFFYEVRLRFYTQPAFALAGLTDEEKDEEHKYYRAEIHLKEGGQDYDVMGWTKEQIIHDILDQYEKHIHFLHVLGKR

Flanking regions ( +/- flanking 50bp)

TGCAATATCGAAAAGTCTTGTCTAAGAAAAATAACAAAAATAGGTTAACTATGAGCCAACAAAATGAAATCACACCAAAAAAAATTAGGATGAAAATTAATCCTCCCGTATTTTACACCTCCGCAATACTTATTATGCTCGTCGTAGGGTTTTCAGCGCTATTTCCTGAACTCGCTAATGACAAGCTAGGGCACCTTCAGGAAAACCTTTTCACCAACGCGAGCTGGTTTTATATTTTAGCCGTAGCATTGGTTTTGCTGAGTGTGACTTATTTAGGGCTATCGCGCTTTGGCGAAATAAAATTAGGCCCTGATCATGCTCGTCCACATTTTAGCTATTTTGCTTGGTTCGCGATGCTGTTTTCAGCAGGTATGGGTATTGGGCTGATGTTCTTTGGTGTCGCAGAACCCGTTATGCACTATTTAATGCCACCCACAGGGGATGCGCAGACGATTGAAGCCGCCAAAGAAGCTATGCGTTTGACTTTCTTCCACTGGGGATTACATGCTTGGGCTATTTACGCCATCGTGGCATTAATTCTGGCGTTTTTTAGCTACCGCCATGGCTTGCCATTAACGTTACGTTCCGCCCTTTATCCTATCATTGGCGACCGTATTTATGGCCCTATTGGGCATGCGGTAGATATTTTTGCTGTGATGGGCACCGTATTTGGTGTCGCAACTTCACTGGGTTTTGGTGTTCTACAAGTTAATGCCGGTTTAAACCATCTATTCGATATTCCAATTAATCCAACCGTGCAAGTGGTTTTAATTGTTGTTATCACCGGGCTTGCTACTATTTCGGTTGTCTCTGGATTAGAAAAAGGTATCCGTTTTTTATCCGAGCTTAACCTTGGTTTAGCCGTTATTCTTCTTTTATTAGTCATTATTCTTGGCCCTACTGTATTGATTTTAAAATCGTTTGTTGAAAATACAGGGGGCTATTTATCAGAAATAGTGAGTAAAACGTTTAATCTTTATGCCTACGAACCAAAATCAAGTGATTGGTTAGGTGGATGGACACTGCTTTATTGGGGCTGGTGGTTATCGTGGTCGCCTTTTGTCGGTATGTTTATTGCACGGATCTCCCGTGGTCGTACTATTCGTGAGTTTGTTGTCGGCGTACTCTTTGTTCCAGCTGGCTTTACCTTACTTTGGATGACTGTCTTTGGTAATACCGCTATCTATTTAATTAAAGATAAAGGTGCAGAAGTTCTTGCGAATATAGTACAACAAGATGTGTCATTAGCACTGTTTGAATTCTTAAACTATTTTCCATTCTCATCAGTGCTTTCCTTTGTCGCAATGCTGATGGTCATTGTCTTTTTTGTCACCTCAGCAGACTCCGGTGCAATGGTGGTTGATACCCTAGCGTCAGGAGGAGATTCAGAAACCCCTGTATGGCAACGTATCTTCTGGGCTGCATTAATGGGTATTTCAGCCATTACCTTGTTATTGGCAGGAGGTTTATCAGCATTACAAACTGTCACCATTGCCAGTGCGTTACCATTTGCCATCGTGCTATTGGCATCAATTTATGGATTAATTAAGGCATTGCGAGTGGATGTTTATAAGCGAGATAGCCAACAGATGACGACTATCGCCCCACCGGCTAGCCGTAATCCTATTCCTTGGCAACGTCGATTAAGAAATATTGCTTATTTTCCTAAACGTTCACATGTAAAACGTTTTATGGAAGAAGTCGTTAATCCTTCCATGGAAATGGTGTCGGCAGAATTAAGCAAACAAGGTATTCAATGCTATATCCATGACGAAGAAGAAGATCGCATCGGCTTTGAAGTGGACTTAGGTGAGGATATGAACTTCTTTTATGAAGTACGATTACGATTCTATACTCAACCCGCTTTCGCGCTAGCAGGCTTAACAGATGAAGAAAAAGATGAAGAGCATAAATACTATCGTGCTGAAATTCATCTCAAAGAAGGTGGGCAAGATTACGATGTCATGGGCTGGACAAAAGAACAAATTATTCATGACATACTCGATCAGTATGAAAAACATATTCACTTCTTACACGTATTAGGTAAAAGGTAATTTCACCTATTACATAAAAACAAAAGAGATGATGGTATAACATCATCTCT