Homologs in group_1617

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10665 FBDBKF_10665 100.0 Morganella morganii S1 alkA 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
EHELCC_15000 EHELCC_15000 100.0 Morganella morganii S2 alkA 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
LHKJJB_14515 LHKJJB_14515 100.0 Morganella morganii S3 alkA 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
HKOGLL_13135 HKOGLL_13135 100.0 Morganella morganii S5 alkA 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
F4V73_RS14375 F4V73_RS14375 83.8 Morganella psychrotolerans - DNA-3-methyladenine glycosylase 2
PMI_RS05980 PMI_RS05980 28.3 Proteus mirabilis HI4320 - DNA-3-methyladenine glycosylase

Distribution of the homologs in the orthogroup group_1617

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1617

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37878 3.01e-20 92 21 4 298 1 alkA DNA-3-methyladenine glycosylase Bacillus subtilis (strain 168)
O31544 1.25e-15 79 28 3 163 3 yfjP Putative DNA-3-methyladenine glycosylase YfjP Bacillus subtilis (strain 168)
Q92383 2.07e-12 68 28 3 186 1 mag1 DNA-3-methyladenine glycosylase 1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P04395 9.55e-11 64 25 4 204 1 alkA DNA-3-methyladenine glycosylase 2 Escherichia coli (strain K12)
O94468 3.52e-09 59 21 1 170 1 mag2 Alkylbase DNA glycosidase-like protein mag2 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P22134 1.25e-05 49 25 7 198 1 MAG1 DNA-3-methyladenine glycosylase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_14830
Feature type CDS
Gene alkA
Product 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
Location 100370 - 101281 (strand: -1)
Length 912 (nucleotides) / 303 (amino acids)

Contig

Accession ZDB_530
Length 141725 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1617
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00730 HhH-GPD superfamily base excision DNA repair protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0122 Replication, recombination and repair (L) L 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase

Protein Sequence

MNNNKNLTITVPLPEPYHTADFLAFHLRDNHHVAEEVTENRVMKGICLHGHPALLTLEISSGEARVTLSTDGPGPLPEDEARMQHLARHMLGLIQPVEEFETQYQDHPLAGPLIRQQKGLRIYQSATPFEAINWAIIGQQISVQAAISIRRRLIQHIGLRHSSGLWCYPDAAHILQTDFDGLRSCGFSVGKANALLALSEQLESGALVLPDVVTPENADAVSASLTAIKGIGTWTVSYALLRGFNYLNGSLHGDVAVRRNLQRLLARDEKITADETQEWLADFAPWRALMAAHLWRLESAAGY

Flanking regions ( +/- flanking 50bp)

AAACGGCTATAATCCGGTCAATTGCCCGCCCTGTTCTGAGGTATGAAAAGTTGAATAATAACAAAAACTTAACGATTACCGTTCCGTTACCTGAGCCCTATCATACAGCGGATTTTCTCGCATTTCATTTACGTGATAATCACCATGTGGCCGAAGAGGTCACGGAAAACCGGGTGATGAAAGGAATTTGCCTGCACGGCCACCCCGCGTTACTGACACTGGAAATCAGTTCAGGAGAAGCGCGTGTCACCCTCAGCACTGACGGCCCGGGGCCACTGCCGGAAGACGAAGCCCGTATGCAGCATCTCGCCCGGCATATGCTCGGTCTGATCCAGCCGGTGGAGGAGTTCGAGACACAATATCAGGATCACCCGCTGGCCGGTCCCCTTATCCGGCAACAGAAAGGGCTGCGGATCTACCAGTCCGCCACACCGTTTGAAGCCATTAACTGGGCGATTATCGGGCAGCAAATCAGTGTTCAGGCCGCGATTTCCATCCGCCGCCGCCTGATTCAGCATATCGGCCTGCGCCACTCCTCCGGACTGTGGTGCTATCCGGATGCGGCACATATTTTACAGACCGATTTCGACGGGCTGCGCAGCTGCGGTTTCTCTGTCGGTAAAGCCAATGCCCTGCTGGCACTGAGTGAGCAACTGGAAAGCGGAGCGCTGGTGCTGCCGGATGTGGTCACACCGGAGAATGCGGACGCGGTTTCCGCCTCACTGACGGCGATCAAAGGTATCGGCACCTGGACGGTCAGCTATGCCCTGCTGCGCGGCTTTAACTATCTGAACGGCTCACTGCACGGTGATGTTGCGGTACGGCGTAATCTGCAGCGCCTGCTGGCGCGGGATGAAAAAATAACGGCGGATGAAACTCAGGAATGGCTGGCAGATTTCGCCCCGTGGCGGGCTCTGATGGCTGCTCATCTGTGGCGGCTGGAGTCTGCCGCCGGGTACTGAGCAAAAAAAATGCCGCAAATGCGGCATTTTTTCTCTCTGTGAACTCAGCG