Homologs in group_1617

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10665 FBDBKF_10665 83.8 Morganella morganii S1 alkA 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
EHELCC_15000 EHELCC_15000 83.8 Morganella morganii S2 alkA 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
NLDBIP_14830 NLDBIP_14830 83.8 Morganella morganii S4 alkA 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
LHKJJB_14515 LHKJJB_14515 83.8 Morganella morganii S3 alkA 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
HKOGLL_13135 HKOGLL_13135 83.8 Morganella morganii S5 alkA 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
PMI_RS05980 PMI_RS05980 28.8 Proteus mirabilis HI4320 - DNA-3-methyladenine glycosylase

Distribution of the homologs in the orthogroup group_1617

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1617

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37878 1.31e-15 79 21 5 294 1 alkA DNA-3-methyladenine glycosylase Bacillus subtilis (strain 168)
O31544 2.76e-15 77 29 3 163 3 yfjP Putative DNA-3-methyladenine glycosylase YfjP Bacillus subtilis (strain 168)
Q92383 5.83e-11 64 28 4 184 1 mag1 DNA-3-methyladenine glycosylase 1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P04395 1.4e-09 61 23 7 288 1 alkA DNA-3-methyladenine glycosylase 2 Escherichia coli (strain K12)
O94468 1.12e-07 55 21 1 170 1 mag2 Alkylbase DNA glycosidase-like protein mag2 Schizosaccharomyces pombe (strain 972 / ATCC 24843)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS14375
Feature type CDS
Gene -
Product DNA-3-methyladenine glycosylase 2
Location 103365 - 104273 (strand: -1)
Length 909 (nucleotides) / 302 (amino acids)

Contig

Accession term accessions NZ_VXKB01000004 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 258164 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1617
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF00730 HhH-GPD superfamily base excision DNA repair protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0122 Replication, recombination and repair (L) L 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase

Protein Sequence

MSKNNKLIITVLLPSHYHTADFLAFHLRDTHNVAEQVAENRVMKGVCLHGHPALLTLETDTGQVRVTLHTDGPTLPGDEAALHHLACHMLGLLQPVQEFESLYQEHPQVGQLIRRQQGLRIYQSATPFEAINWAIIGQQISVHAAISIRRRLIQHINLRHSGGLWCYPDAAHILKTDFDGLRSCGFSVGKANALLTLSGQLESGELVLPDVVTPDNADAVSASLTAIKGIGTWTVSYALLRGFNYLNGSLHGDVAVRRNLQRLLEREEKLTADETQAWLAEFAPHRALMAAHLWRLESAAGY

Flanking regions ( +/- flanking 50bp)

AGACAGACCCGGTCCGGTTTTCTGTCCGCTCCGCAACAAGGTACAATAATGTGAGTAAAAACAACAAATTAATTATTACAGTTTTGTTACCATCCCACTATCATACAGCGGATTTCCTTGCTTTTCATTTACGGGATACGCATAACGTTGCAGAGCAGGTCGCAGAGAACCGGGTGATGAAAGGGGTTTGCCTGCACGGACATCCTGCACTGCTGACACTGGAAACCGATACCGGACAGGTACGGGTGACATTGCATACCGATGGTCCGACGCTGCCCGGCGACGAAGCGGCACTGCACCATCTCGCCTGTCATATGCTGGGATTATTACAGCCGGTACAGGAATTTGAGTCCCTGTATCAGGAACATCCGCAAGTCGGGCAGTTGATCCGCCGGCAGCAGGGGCTGCGCATCTATCAATCTGCCACACCATTTGAAGCGATTAACTGGGCGATTATCGGGCAGCAAATCAGTGTTCATGCGGCGATCTCTATCCGCCGCCGCCTGATTCAGCATATCAATCTGCGCCATTCCGGCGGGCTGTGGTGCTACCCGGATGCCGCGCATATCCTGAAAACAGATTTTGACGGACTGCGCAGCTGTGGTTTTTCTGTCGGCAAAGCCAATGCATTGCTGACGCTGAGTGGGCAGTTGGAAAGCGGTGAGCTGGTGCTGCCGGATGTGGTCACGCCGGACAATGCAGACGCGGTTTCTGCGTCACTGACGGCCATTAAAGGCATCGGCACCTGGACGGTCAGCTATGCACTGTTGCGTGGATTTAATTACCTGAACGGCTCACTGCATGGTGATGTGGCAGTGCGGCGCAATTTACAGCGCCTGCTTGAACGGGAAGAGAAACTGACGGCGGATGAAACACAGGCATGGCTGGCAGAGTTTGCCCCGCATCGTGCATTGATGGCGGCACATTTGTGGCGGCTGGAATCTGCCGCCGGATATTAACAGGCATTAAAGTGCCGCAGATACACTGCGGCAACTTCAGATAGTATCAG