Homologs in group_961

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05285 FBDBKF_05285 100.0 Morganella morganii S1 oppC oligopeptide ABC transporter permease OppC
EHELCC_12305 EHELCC_12305 100.0 Morganella morganii S2 oppC oligopeptide ABC transporter permease OppC
LHKJJB_12505 LHKJJB_12505 100.0 Morganella morganii S3 oppC oligopeptide ABC transporter permease OppC
HKOGLL_11120 HKOGLL_11120 100.0 Morganella morganii S5 oppC oligopeptide ABC transporter permease OppC
F4V73_RS05740 F4V73_RS05740 94.7 Morganella psychrotolerans oppC oligopeptide ABC transporter permease OppC
PMI_RS07130 PMI_RS07130 87.7 Proteus mirabilis HI4320 oppC oligopeptide ABC transporter permease OppC

Distribution of the homologs in the orthogroup group_961

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_961

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P08006 0.0 507 85 0 302 1 oppC Oligopeptide transport system permease protein OppC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0AFH6 9.56e-175 488 86 0 302 1 oppC Oligopeptide transport system permease protein OppC Escherichia coli (strain K12)
P0AFH7 9.56e-175 488 86 0 302 3 oppC Oligopeptide transport system permease protein OppC Escherichia coli O157:H7
P45053 5.74e-155 438 71 1 302 3 oppC Oligopeptide transport system permease protein OppC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P24139 1.73e-86 264 44 1 287 1 oppC Oligopeptide transport system permease protein OppC Bacillus subtilis (strain 168)
P42063 6.9e-74 232 41 3 292 3 appC Oligopeptide transport system permease protein AppC Bacillus subtilis (strain 168)
P26904 1.4e-73 231 42 3 303 2 dppC Dipeptide transport system permease protein DppC Bacillus subtilis (strain 168)
P94312 9.38e-61 198 37 1 277 3 dppC Dipeptide transport system permease protein DppC Alkalihalophilus pseudofirmus (strain ATCC BAA-2126 / JCM 17055 / OF4)
Q8FWN9 9.87e-61 198 37 2 276 3 BRA0407 Putative peptide permease protein BRA0407/BS1330_II0404 Brucella suis biovar 1 (strain 1330)
Q83S25 1.06e-60 198 37 2 279 3 gsiD Glutathione transport system permease protein GsiD Shigella flexneri
P0C2L2 1.06e-60 198 37 2 279 3 gsiD Glutathione transport system permease protein GsiD Shigella flexneri serotype 5b (strain 8401)
Q8FJK8 1.69e-60 197 35 2 298 3 gsiD Glutathione transport system permease protein GsiD Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TJL6 1.69e-60 197 35 2 298 3 gsiD Glutathione transport system permease protein GsiD Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q3Z3V1 4.79e-60 196 36 2 279 3 gsiD Glutathione transport system permease protein GsiD Shigella sonnei (strain Ss046)
Q323W2 4.79e-60 196 36 2 279 3 gsiD Glutathione transport system permease protein GsiD Shigella boydii serotype 4 (strain Sb227)
Q8X6V6 4.79e-60 196 36 2 279 3 gsiD Glutathione transport system permease protein GsiD Escherichia coli O157:H7
A5VU89 4.81e-60 196 37 2 276 3 BOV_A0350 Putative peptide permease protein BOV_A0350 Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
P75799 7.3e-60 196 36 2 279 1 gsiD Glutathione transport system permease protein GsiD Escherichia coli (strain K12)
Q8YBN8 8.16e-60 196 37 2 276 3 BMEII0861 Putative peptide permease protein BMEII0861 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q2YK65 8.16e-60 196 37 2 276 3 BAB2_0815 Putative peptide permease protein BAB2_0815 Brucella abortus (strain 2308)
Q577J7 8.16e-60 196 37 2 276 3 BruAb2_0794 Putative peptide permease protein BruAb2_0794 Brucella abortus biovar 1 (strain 9-941)
Q1RE93 9.56e-60 196 36 2 279 3 gsiD Glutathione transport system permease protein GsiD Escherichia coli (strain UTI89 / UPEC)
A1A971 9.56e-60 196 36 2 279 3 gsiD Glutathione transport system permease protein GsiD Escherichia coli O1:K1 / APEC
Q32IB8 1.62e-58 192 35 2 279 3 gsiD Glutathione transport system permease protein GsiD Shigella dysenteriae serotype 1 (strain Sd197)
P66965 2.62e-58 191 40 4 276 3 BQ2027_MB1313C Putative peptide transport permease protein Mb1313c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WFZ9 2.62e-58 191 40 4 276 1 Rv1282c Putative peptide transport permease protein Rv1282c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WFZ8 2.62e-58 191 40 4 276 3 MT1319 Putative peptide transport permease protein MT1319 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
Q6D3B2 4.46e-57 189 35 2 296 3 gsiD Glutathione transport system permease protein GsiD Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q7CQV4 6.69e-54 181 37 2 255 3 gsiD Glutathione transport system permease protein GsiD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8XF88 6.69e-54 181 37 2 255 3 gsiD Glutathione transport system permease protein GsiD Salmonella typhi
Q5PGP6 6.69e-54 181 37 2 255 3 gsiD Glutathione transport system permease protein GsiD Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57RA9 6.69e-54 181 37 2 255 3 gsiD Glutathione transport system permease protein GsiD Salmonella choleraesuis (strain SC-B67)
A2RI76 1.63e-52 178 38 5 322 1 dppC Dipeptide transport system permease protein DppC Lactococcus lactis subsp. cremoris (strain MG1363)
P77463 3.93e-51 173 36 1 261 1 ddpC Probable D,D-dipeptide transport system permease protein DdpC Escherichia coli (strain K12)
P0A4N0 3.72e-44 155 29 3 292 3 amiD Oligopeptide transport system permease protein AmiD Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
P0A4M9 3.72e-44 155 29 3 292 3 amiD Oligopeptide transport system permease protein AmiD Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Q8YDG8 7.85e-43 152 32 2 270 3 BMEII0207/BMEII0208 Putative peptide transport system permease protein BMEII0207/BMEII0208 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q2YJK0 7.85e-43 152 32 2 270 3 BAB2_1051 Putative peptide transport system permease protein BAB2_1051 Brucella abortus (strain 2308)
Q8VQK5 7.85e-43 152 32 2 270 3 BruAb2_1032 Putative peptide transport system permease protein BruAb2_1032 Brucella abortus biovar 1 (strain 9-941)
Q2YXY8 1.76e-42 150 34 0 216 3 nikC Nickel import system permease protein NikC Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q8FUW9 1.84e-42 150 35 1 219 3 BRA1093 Putative peptide transport system permease protein BRA1093/BS1330_II1085 Brucella suis biovar 1 (strain 1330)
Q7A0Y0 2.88e-42 149 33 0 216 3 nikC Nickel import system permease protein NikC Staphylococcus aureus (strain MW2)
Q6G9H9 2.88e-42 149 33 0 216 3 nikC Nickel import system permease protein NikC Staphylococcus aureus (strain MSSA476)
Q5HG39 2.88e-42 149 33 0 216 3 nikC Nickel import system permease protein NikC Staphylococcus aureus (strain COL)
Q2FYQ6 2.88e-42 149 33 0 216 1 nikC Nickel import system permease protein NikC Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FH56 2.88e-42 149 33 0 216 3 nikC Nickel import system permease protein NikC Staphylococcus aureus (strain USA300)
Q7A5Q7 4.46e-42 149 33 0 216 3 nikC Nickel import system permease protein NikC Staphylococcus aureus (strain N315)
Q99UA1 4.46e-42 149 33 0 216 3 nikC Nickel import system permease protein NikC Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q6GH26 1.02e-40 145 33 0 216 3 nikC Nickel import system permease protein NikC Staphylococcus aureus (strain MRSA252)
P51000 3.75e-40 144 29 1 272 3 dppC Dipeptide transport system permease protein DppC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q53192 4.39e-40 144 35 2 221 3 NGR_a01420 Probable peptide ABC transporter permease protein y4tQ Sinorhizobium fredii (strain NBRC 101917 / NGR234)
A0A0H2ZFV0 5.28e-40 144 29 2 274 1 dppC Di/tripeptide transport system permease protein DppC Pseudomonas aeruginosa (strain UCBPP-PA14)
P0AFA9 5.41e-37 136 31 1 226 1 nikC Nickel transport system permease protein NikC Escherichia coli (strain K12)
P0AFB0 5.41e-37 136 31 1 226 3 nikC Nickel transport system permease protein NikC Escherichia coli O157:H7
P0A4P0 1.31e-35 132 28 4 291 3 oppC Oligopeptide transport system permease protein OppC Lactococcus lactis subsp. cremoris (strain SK11)
Q2FVE9 2.09e-35 132 30 1 270 1 cntC Metal-staphylopine import system permease protein CntC Staphylococcus aureus (strain NCTC 8325 / PS 47)
A0A0H3JU73 2.11e-35 132 30 1 270 1 cntC Metal-staphylopine import system permease protein CntC Staphylococcus aureus (strain Mu50 / ATCC 700699)
P0A4N9 3.5e-35 131 28 4 291 1 oppC Oligopeptide transport system permease protein OppC Lactococcus lactis subsp. lactis (strain IL1403)
P0AEG1 7.85e-35 130 32 1 272 1 dppC Dipeptide transport system permease protein DppC Escherichia coli (strain K12)
P0AEG2 7.85e-35 130 32 1 272 3 dppC Dipeptide transport system permease protein DppC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AEG3 7.85e-35 130 32 1 272 3 dppC Dipeptide transport system permease protein DppC Escherichia coli O157:H7
P33915 8.02e-35 132 33 1 220 1 yejE Inner membrane ABC transporter permease protein YejE Escherichia coli (strain K12)
Q7D203 1.27e-31 124 30 1 220 3 yejE Peptidoglycan transport system permease protein YejE Agrobacterium fabrum (strain C58 / ATCC 33970)
P0A2J5 7.72e-28 112 28 1 273 2 sapC Peptide transport system permease protein SapC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2J6 7.72e-28 112 28 1 273 3 sapC Peptide transport system permease protein SapC Salmonella typhi
P0AGH7 2.31e-26 108 27 1 273 3 sapC Peptide transport system permease protein SapC Shigella flexneri
P0AGH5 2.31e-26 108 27 1 273 1 sapC Putrescine export system permease protein SapC Escherichia coli (strain K12)
P0AGH6 2.31e-26 108 27 1 273 3 sapC Peptide transport system permease protein SapC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P47324 8.34e-20 91 32 10 255 3 oppC Oligopeptide transport system permease protein OppC Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
P75553 1.19e-17 85 32 9 233 3 oppC Oligopeptide transport system permease protein OppC Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P45287 6.9e-17 82 22 3 276 3 sapC Peptide transport system permease protein SapC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0AFH5 0.000601 44 30 5 140 3 oppB Oligopeptide transport system permease protein OppB Shigella flexneri
P0AFH2 0.000601 44 30 5 140 1 oppB Oligopeptide transport system permease protein OppB Escherichia coli (strain K12)
P0AFH3 0.000601 44 30 5 140 3 oppB Oligopeptide transport system permease protein OppB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AFH4 0.000601 44 30 5 140 3 oppB Oligopeptide transport system permease protein OppB Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_12645
Feature type CDS
Gene oppC
Product oligopeptide ABC transporter permease OppC
Location 118804 - 119712 (strand: 1)
Length 909 (nucleotides) / 302 (amino acids)

Contig

Accession ZDB_527
Length 181446 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_961
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00528 Binding-protein-dependent transport system inner membrane component
PF12911 N-terminal TM domain of oligopeptide transport permease C

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1173 Amino acid transport and metabolism (E)
Inorganic ion transport and metabolism (P)		 EP ABC-type dipeptide/oligopeptide/nickel transport system, permease component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K15582 oligopeptide transport system permease protein beta-Lactam resistance
ABC transporters
Quorum sensing		 -

Protein Sequence

MLPNEKNREALENFTEQLDVEGRSLWADARRRFMHNKAAITSLCLLFLITLFVIFMPMLSEFAYDDTDWGMMSAAPDTESGHYFGTDSSGRDLLVRVAIGGRISLMVGLAAALVAVLVGTLYGAMSGYVGGKTDSVMMRVLEILNSFPFMFFVILLVTFFGQNIFLIFVAIGMVSWLDMARIVRGQTLSLKSKEFIEAAKVCGVPTRNIILRHIVPNVLGVVVVYASLLVPSMILFESFLSFLGLGTQEPLSSWGALLNDGANSMEVSPWLLMFPAAFLVVTLFCFNFIGDGLRDALDPKDR

Flanking regions ( +/- flanking 50bp)

CTGTATGCCGTTATCGATCCGAAAATCCGTTATTAGTCCCGGAGCACGCTATGTTACCGAATGAAAAAAACCGCGAAGCTCTGGAAAATTTCACGGAGCAGCTTGATGTCGAAGGACGCAGCCTGTGGGCGGATGCCCGCCGCCGCTTTATGCATAACAAAGCCGCGATCACCAGTCTGTGTCTGTTGTTTTTAATTACCCTGTTTGTGATTTTTATGCCGATGCTGTCGGAGTTCGCCTATGACGATACCGACTGGGGCATGATGTCCGCAGCACCGGATACGGAGAGCGGCCACTATTTTGGTACCGACTCCTCCGGCCGTGATCTGCTGGTGCGTGTGGCTATCGGCGGGCGTATCTCGCTGATGGTGGGACTGGCGGCAGCGCTGGTCGCTGTGCTGGTGGGAACACTGTACGGCGCGATGTCCGGCTATGTCGGCGGCAAAACTGACTCGGTCATGATGCGCGTGCTGGAAATCCTCAACTCCTTCCCGTTTATGTTCTTTGTTATCCTGCTGGTGACCTTCTTTGGTCAGAATATTTTTCTGATTTTCGTGGCTATCGGCATGGTTTCCTGGCTGGATATGGCGCGTATCGTGCGCGGCCAGACACTGAGCCTGAAGAGCAAAGAATTTATTGAGGCGGCGAAGGTCTGTGGTGTGCCGACCCGCAATATCATTCTGCGTCATATTGTCCCGAACGTGCTGGGTGTGGTGGTGGTTTACGCCTCACTGCTGGTGCCGAGTATGATCCTGTTTGAATCCTTCCTCAGCTTCCTCGGGCTGGGTACACAGGAGCCGTTAAGCAGCTGGGGCGCGCTGCTCAATGACGGTGCTAACTCAATGGAAGTTTCGCCCTGGTTACTGATGTTCCCGGCAGCATTCCTGGTGGTGACTCTGTTTTGTTTCAACTTTATCGGTGACGGGCTGCGTGATGCCCTTGACCCGAAAGATCGCTGAGGAGGCCGCCAATGACTCAGTTATTACAGGTTAACGACCTGAACGTGACA