Homologs in group_1054

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05970 FBDBKF_05970 100.0 Morganella morganii S1 bamA outer membrane protein assembly factor BamA
EHELCC_09015 EHELCC_09015 100.0 Morganella morganii S2 bamA outer membrane protein assembly factor BamA
LHKJJB_08360 LHKJJB_08360 100.0 Morganella morganii S3 bamA outer membrane protein assembly factor BamA
HKOGLL_07910 HKOGLL_07910 100.0 Morganella morganii S5 bamA outer membrane protein assembly factor BamA
F4V73_RS15925 F4V73_RS15925 94.7 Morganella psychrotolerans bamA outer membrane protein assembly factor BamA
PMI_RS11245 PMI_RS11245 79.4 Proteus mirabilis HI4320 bamA outer membrane protein assembly factor BamA

Distribution of the homologs in the orthogroup group_1054

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1054

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q7N8N9 0.0 1366 80 1 798 3 bamA Outer membrane protein assembly factor BamA Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Q9S341 0.0 1361 80 2 800 3 bamA Outer membrane protein assembly factor BamA Photorhabdus luminescens
A8GID8 0.0 1313 78 1 801 3 bamA Outer membrane protein assembly factor BamA Serratia proteamaculans (strain 568)
B1JQG8 0.0 1303 77 1 798 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q667J7 0.0 1303 77 1 798 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TL83 0.0 1303 77 1 798 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis (strain Pestoides F)
Q1CFF5 0.0 1303 77 1 798 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis bv. Antiqua (strain Nepal516)
A9R388 0.0 1303 77 1 798 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis bv. Antiqua (strain Angola)
Q8ZH58 0.0 1303 77 1 798 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis
B2JZ26 0.0 1303 77 1 798 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CAM6 0.0 1303 77 1 798 3 bamA Outer membrane protein assembly factor BamA Yersinia pestis bv. Antiqua (strain Antiqua)
A7FFH7 0.0 1303 77 1 798 3 bamA Outer membrane protein assembly factor BamA Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
C5B7R5 0.0 1276 74 1 798 3 bamA Outer membrane protein assembly factor BamA Edwardsiella ictaluri (strain 93-146)
D5CHY0 0.0 1274 75 2 805 1 bamA Outer membrane protein assembly factor BamA Enterobacter cloacae subsp. cloacae (strain ATCC 13047 / DSM 30054 / NBRC 13535 / NCTC 10005 / WDCM 00083 / NCDC 279-56)
A7MGT7 0.0 1273 75 3 804 3 bamA Outer membrane protein assembly factor BamA Cronobacter sakazakii (strain ATCC BAA-894)
B4TYD7 0.0 1266 74 4 817 3 bamA Outer membrane protein assembly factor BamA Salmonella schwarzengrund (strain CVM19633)
B4SV06 0.0 1266 74 4 817 3 bamA Outer membrane protein assembly factor BamA Salmonella newport (strain SL254)
B5RHG2 0.0 1266 74 4 817 3 bamA Outer membrane protein assembly factor BamA Salmonella gallinarum (strain 287/91 / NCTC 13346)
A9MPI4 0.0 1263 74 4 817 3 bamA Outer membrane protein assembly factor BamA Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
A4W6S2 0.0 1259 75 3 806 3 bamA Outer membrane protein assembly factor BamA Enterobacter sp. (strain 638)
A8ALB1 0.0 1259 74 4 812 3 bamA Outer membrane protein assembly factor BamA Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q3Z5I1 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Shigella sonnei (strain Ss046)
P0A943 0.0 1259 73 4 817 2 bamA Outer membrane protein assembly factor BamA Shigella flexneri
Q0T832 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Shigella flexneri serotype 5b (strain 8401)
Q325W3 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Shigella boydii serotype 4 (strain Sb227)
B2U320 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q1RG12 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain UTI89 / UPEC)
B6HZF1 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain SE11)
B7N844 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P0A940 0.0 1259 73 4 817 1 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain K12)
B1IQG4 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
P0A941 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TLF6 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A7ZWC3 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O9:H4 (strain HS)
B1XD46 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain K12 / DH10B)
C4ZRR9 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain K12 / MC4100 / BW2952)
B7M1Y0 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O8 (strain IAI1)
B7NID9 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B5Z0F6 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O157:H7 (strain EC4115 / EHEC)
P0A942 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O157:H7
B7LGN8 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain 55989 / EAEC)
B7MBF8 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O45:K1 (strain S88 / ExPEC)
B7UIM2 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A7ZHR7 0.0 1259 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O139:H28 (strain E24377A / ETEC)
A1A7M1 0.0 1258 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O1:K1 / APEC
Q6D8D5 0.0 1257 74 3 814 3 bamA Outer membrane protein assembly factor BamA Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
B1LGX9 0.0 1257 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli (strain SMS-3-5 / SECEC)
B7MP37 0.0 1257 73 4 817 3 bamA Outer membrane protein assembly factor BamA Escherichia coli O81 (strain ED1a)
Q32JT2 0.0 1256 73 4 817 3 bamA Outer membrane protein assembly factor BamA Shigella dysenteriae serotype 1 (strain Sd197)
C6DAJ1 0.0 1254 74 3 809 3 bamA Outer membrane protein assembly factor BamA Pectobacterium carotovorum subsp. carotovorum (strain PC1)
A9N0S6 0.0 1253 74 3 809 3 bamA Outer membrane protein assembly factor BamA Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B5R3J0 0.0 1253 74 3 809 3 bamA Outer membrane protein assembly factor BamA Salmonella enteritidis PT4 (strain P125109)
B5FJ24 0.0 1253 74 3 809 3 bamA Outer membrane protein assembly factor BamA Salmonella dublin (strain CT_02021853)
Q8ZRP0 0.0 1253 74 3 809 1 bamA Outer membrane protein assembly factor BamA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B5BAN4 0.0 1252 74 3 809 3 bamA Outer membrane protein assembly factor BamA Salmonella paratyphi A (strain AKU_12601)
Q5PD65 0.0 1252 74 3 809 3 bamA Outer membrane protein assembly factor BamA Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B5F8T8 0.0 1251 74 3 809 3 bamA Outer membrane protein assembly factor BamA Salmonella agona (strain SL483)
Q8Z9A3 0.0 1250 74 3 809 3 bamA Outer membrane protein assembly factor BamA Salmonella typhi
C0Q6K0 0.0 1249 74 3 810 3 bamA Outer membrane protein assembly factor BamA Salmonella paratyphi C (strain RKS4594)
Q57T31 0.0 1248 74 3 810 3 bamA Outer membrane protein assembly factor BamA Salmonella choleraesuis (strain SC-B67)
B7LW74 0.0 1248 75 4 809 3 bamA Outer membrane protein assembly factor BamA Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B4TK52 0.0 1247 74 3 809 3 bamA Outer membrane protein assembly factor BamA Salmonella heidelberg (strain SL476)
B5Y1J4 0.0 1245 73 4 812 3 bamA Outer membrane protein assembly factor BamA Klebsiella pneumoniae (strain 342)
A6T4X9 0.0 1244 73 3 812 3 bamA Outer membrane protein assembly factor BamA Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B2VE18 0.0 1243 74 2 803 3 bamA Outer membrane protein assembly factor BamA Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
Q2NRL5 0.0 1213 73 3 808 3 bamA Outer membrane protein assembly factor BamA Sodalis glossinidius (strain morsitans)
P44935 0.0 703 44 7 805 1 bamA Outer membrane protein assembly factor BamA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P46024 0.0 703 44 8 806 1 bamA Outer membrane protein assembly factor BamA Haemophilus influenzae
O32629 0.0 701 45 8 802 3 bamA Outer membrane protein assembly factor BamA Haemophilus influenzae
Q8K9S5 0.0 616 36 2 804 3 bamA Outer membrane protein assembly factor BamA Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q9K1H0 9.61e-147 453 34 12 814 1 bamA Outer membrane protein assembly factor BamA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P57331 1.01e-133 413 35 0 544 3 bamA Outer membrane protein assembly factor BamA Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q729H8 4.02e-41 165 24 23 804 3 bamA Outer membrane protein assembly factor BamA Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough)
C6V5K2 5.17e-39 158 22 19 777 3 bamA Outer membrane protein assembly factor BamA Neorickettsia risticii (strain Illinois)
O83346 3.56e-21 102 23 14 529 1 tp92 Putative outer membrane protein assembly factor TP_0326 Treponema pallidum (strain Nichols)
O25369 4.34e-21 102 24 7 433 3 bamA Outer membrane protein assembly factor BamA Helicobacter pylori (strain ATCC 700392 / 26695)
O25369 0.00025 48 27 8 174 3 bamA Outer membrane protein assembly factor BamA Helicobacter pylori (strain ATCC 700392 / 26695)
P44038 2.04e-11 71 23 25 561 1 tama Translocation and assembly module subunit TamA Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q5U3I0 2.15e-10 67 23 18 494 2 samm50b Sorting and assembly machinery component 50 homolog B Danio rerio
Q6AXV4 3.29e-10 67 23 17 473 1 Samm50 Sorting and assembly machinery component 50 homolog Rattus norvegicus
Q6P806 1.59e-09 64 23 18 473 2 samm50 Sorting and assembly machinery component 50 homolog Xenopus tropicalis
Q8BGH2 2.72e-09 63 23 15 486 1 Samm50 Sorting and assembly machinery component 50 homolog Mus musculus
Q9Y512 3.53e-09 63 23 17 490 1 SAMM50 Sorting and assembly machinery component 50 homolog Homo sapiens
Q2HJ55 1.19e-08 62 22 19 546 2 SAMM50 Sorting and assembly machinery component 50 homolog Bos taurus
E1WAU4 4.29e-07 57 22 25 569 3 tamA Translocation and assembly module subunit TamA Salmonella typhimurium (strain SL1344)
Q10478 1.14e-06 55 27 5 165 3 SPAC17C9.06 SAM50-like protein SPAC17C9.06 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
D2TN56 2.11e-06 55 22 28 578 1 tamA Translocation and assembly module subunit TamA Citrobacter rodentium (strain ICC168)
P0ADE4 2.48e-06 54 22 25 567 1 tamA Translocation and assembly module subunit TamA Escherichia coli (strain K12)
P0ADE5 2.48e-06 54 22 25 567 3 tamA Translocation and assembly module subunit TamA Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_09395
Feature type CDS
Gene bamA
Product outer membrane protein assembly factor BamA
Location 19134 - 21530 (strand: -1)
Length 2397 (nucleotides) / 798 (amino acids)

Contig

Accession ZDB_524
Length 215957 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1054
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01103 Omp85 superfamily domain
PF07244 Surface antigen variable number repeat

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4775 Cell wall/membrane/envelope biogenesis (M) M Outer membrane protein assembly factor BamA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07277 outer membrane protein insertion porin family Mitophagy - animal -

Protein Sequence

MAMKKLLIASLLLGSFTAYGSDGFVVQDIQFEGLQRVAVGAALLNMPVRVGDTASDEDIGRTIRALFATGNFEDVRVLREGNVLLVQVKERPTIANITFSGNKSVKDDMLKQNLEASRIRVGEALDRTMLSNIEKGLEDFYHSVGKYNATVKAVVTPLPRNRIDVKFVFAEGVSATIQQINIVGNTQFTTAELVNRFQLRDDVPWWNLAADQKYQKQKLAGDLETLRSFYLDRGYAKFNIDSTQVSLTPDKKGIYITINVTEGEQYQIAGVQVAGETAGHSAEITELTAIEPGSLYNGAQVTKMENDVKNMLGRYGYAYPRVMTQPEINEADKTVVLHVNVDAGNRFYVRQIRFAGNDVSKDSVLRREMRQMEGAWLGNDLVEAGKERLNRTGYFETVEVETQRVPGVPDQVDVVYKVKERNTGSLNFGVGFGTESGVSFQVGVTQDNWLGTGYQVGANASKNDYSTYAELSLTDPFFTVDGVSLGGRIFYNDFRADDADLSGYTNKTYGVDGTLGFPINENNSIRLGLGYVHNTLSRMEPQVNMWRYLHSMGEEPNYKDRAEFRADDFTLTTAWVYNNLDRGYFPTSGVKSTVSAKVTVPGSDNEYYKLIADTTGYYPIDENGSWVVMGRGRLGFGDGLGGKELPFYENFYAGGSGTVRGFRSNTIGPKAVYYDGASDKLRSDSPSRDAIGGNAMAVASMELITPTPFIDEKYTNSVRTSLFVDAGTVWDTNWDNTELMQKYGIPDYSKAGNIRVSTGVAFQWISPLGPLVFSYAKPIKDYQGDRTEQFQFNIGKTW

Flanking regions ( +/- flanking 50bp)

CGCTTCTGATTAAGGAAGACCGGGACCGGTAAGGAAAACGCATAACAACGATGGCGATGAAAAAGTTGCTCATAGCGTCGCTGCTGCTTGGCAGCTTCACTGCATACGGTTCAGACGGATTCGTGGTTCAGGACATTCAGTTTGAAGGTCTTCAGCGCGTCGCCGTTGGTGCTGCATTACTGAACATGCCTGTCCGTGTCGGAGACACGGCCAGTGATGAGGATATCGGACGTACCATTCGCGCACTGTTCGCGACAGGTAACTTTGAAGATGTCCGCGTCCTGCGTGAAGGTAATGTACTGCTGGTTCAGGTGAAGGAACGTCCGACCATTGCAAATATCACCTTCTCGGGTAACAAATCCGTGAAGGACGACATGCTCAAACAGAACCTGGAAGCATCCCGTATCCGCGTCGGGGAAGCCCTTGACCGGACGATGCTGTCAAACATTGAAAAGGGGCTGGAAGATTTCTATCACAGTGTCGGTAAGTATAACGCGACGGTAAAAGCCGTTGTCACACCACTGCCGCGCAACCGTATTGATGTGAAATTCGTTTTTGCGGAAGGTGTATCCGCGACTATTCAGCAAATCAATATCGTCGGTAACACTCAGTTTACCACGGCTGAACTGGTTAACCGTTTCCAGCTGCGTGATGATGTACCGTGGTGGAACCTGGCGGCTGATCAGAAATACCAGAAACAGAAACTGGCCGGTGACCTTGAAACCCTGCGCAGCTTCTATCTGGATCGCGGTTACGCGAAATTCAATATTGATTCGACTCAGGTCAGCCTGACGCCGGACAAAAAAGGTATCTATATCACCATCAACGTGACCGAGGGCGAGCAGTATCAGATTGCCGGGGTTCAGGTTGCAGGTGAAACGGCCGGTCACTCCGCTGAAATCACCGAGCTGACCGCCATTGAGCCGGGTTCACTCTATAATGGTGCTCAGGTCACCAAAATGGAGAATGATGTCAAAAATATGCTCGGCCGTTACGGCTATGCGTATCCGCGCGTCATGACCCAGCCGGAAATTAATGAAGCCGATAAAACCGTGGTTCTGCATGTGAATGTGGATGCCGGTAACCGTTTCTATGTCCGCCAGATCCGTTTCGCCGGTAACGACGTGAGTAAAGACTCCGTTCTGCGCCGTGAAATGCGTCAGATGGAAGGGGCATGGTTAGGTAACGATCTGGTTGAAGCCGGTAAAGAGCGTCTGAACCGTACCGGTTACTTTGAAACCGTTGAGGTGGAAACCCAGCGTGTGCCGGGTGTGCCGGATCAGGTCGATGTCGTCTATAAAGTCAAAGAGCGTAACACCGGTTCCCTGAACTTTGGTGTGGGCTTCGGTACAGAGAGCGGCGTCAGCTTCCAGGTGGGTGTCACCCAGGATAACTGGTTAGGTACCGGTTATCAGGTTGGTGCGAACGCCAGTAAGAACGACTACTCAACGTACGCTGAACTGTCACTGACTGACCCGTTCTTCACGGTTGATGGTGTGAGTCTCGGCGGCCGTATTTTCTACAACGACTTCCGTGCGGATGATGCAGACTTGTCCGGTTACACCAACAAAACCTATGGTGTGGACGGAACGCTCGGCTTCCCGATCAACGAAAATAACTCTATCCGTTTAGGTCTGGGTTATGTGCATAACACCCTGTCACGTATGGAACCACAGGTTAATATGTGGCGTTATCTGCACTCAATGGGTGAAGAGCCGAACTATAAAGATCGCGCAGAATTCCGTGCCGATGACTTCACGCTGACGACTGCCTGGGTTTATAACAACCTCGACCGTGGTTATTTCCCGACTTCCGGTGTGAAATCCACCGTGAGTGCGAAAGTCACAGTTCCGGGTTCTGATAACGAATACTATAAACTGATCGCCGATACCACCGGTTACTACCCTATTGACGAAAACGGCAGCTGGGTTGTGATGGGACGTGGTCGTTTAGGCTTCGGTGATGGTCTCGGCGGCAAAGAATTGCCGTTCTATGAGAACTTCTATGCCGGTGGTTCCGGTACCGTCCGTGGTTTCCGTTCCAATACCATCGGTCCGAAAGCAGTCTACTATGACGGGGCATCCGATAAGTTACGCAGCGACAGCCCGTCCCGTGATGCTATCGGGGGTAACGCGATGGCGGTGGCCAGTATGGAACTGATCACTCCGACACCGTTTATCGACGAAAAATACACGAATTCTGTCCGCACATCACTCTTTGTGGATGCCGGTACAGTGTGGGATACCAATTGGGACAATACTGAGCTTATGCAGAAGTATGGTATTCCTGATTACAGTAAAGCAGGGAACATCCGTGTTTCCACCGGTGTTGCGTTCCAGTGGATTTCTCCGCTCGGACCATTGGTCTTCTCTTATGCGAAGCCAATCAAAGACTACCAGGGTGACCGGACAGAACAGTTCCAGTTTAATATCGGTAAGACCTGGTAATTGCAGTACAGGGTTACCATGCGTAATAACCAGTACGCTCAGTGTGCAAA