Homologs in group_2667

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04735 FBDBKF_04735 100.0 Morganella morganii S1 - Colicin-E3
EHELCC_06025 EHELCC_06025 100.0 Morganella morganii S2 - Colicin-E3
LHKJJB_03225 LHKJJB_03225 100.0 Morganella morganii S3 - Colicin-E3
HKOGLL_06700 HKOGLL_06700 100.0 Morganella morganii S5 - Colicin-E3
F4V73_RS04520 F4V73_RS04520 35.0 Morganella psychrotolerans - colicin-like bacteriocin tRNase domain-containing protein

Distribution of the homologs in the orthogroup group_2667

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2667

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P17999 8.25e-51 177 71 1 121 3 None Colicin-E6 Escherichia coli
P00646 9.74e-49 171 76 0 103 1 ceaC Colicin E3 Escherichia coli
P00645 2.02e-47 168 77 0 103 3 ccl Cloacin Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_06345
Feature type CDS
Gene -
Product Colicin-E3
Location 250559 - 251311 (strand: 1)
Length 753 (nucleotides) / 250 (amino acids)

Contig

Accession ZDB_521
Length 325332 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2667
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF03515 Colicin-like bacteriocin tRNase domain
PF09000 Cytotoxic

Protein Sequence

MVVTLPSELVTTVKPADIRGQKTVPAMVVAQGVVDAVKQEHTVALTMAENTDIPVITAQKTKKPNVYTAEVVPGMKPLRIRMVSPSGKQVPPSKSVELPAAEHYLPQPDSGKTHHAFIVFGDDYQPVYISVTRKEWQVKPYVEAKKAEEEKKRQGVKDKGHSYHPEPDVEEIKGLGELKPGKKKTPKQGGAGKRARWVGDKGRKIYEWDYQHGELEGYRASDGQHLGAFDPKTGKQLKPADPERNIKKYL

Flanking regions ( +/- flanking 50bp)

CCCTTATTGATTTAAACCGTGCGAAACTTGTCGATATGAGGCAGGCGGATATGGTTGTCACGCTGCCGTCTGAACTAGTCACCACGGTAAAACCGGCAGACATCAGGGGACAAAAAACGGTTCCCGCAATGGTTGTGGCACAGGGTGTGGTGGATGCCGTTAAGCAGGAGCACACGGTTGCACTCACAATGGCGGAAAATACGGATATTCCGGTCATCACGGCACAAAAAACGAAGAAACCGAATGTGTATACCGCAGAGGTTGTCCCGGGTATGAAGCCGCTGCGGATAAGAATGGTGTCACCATCAGGTAAGCAGGTTCCCCCCTCAAAAAGTGTGGAACTTCCGGCCGCAGAGCATTATCTTCCTCAGCCGGACAGCGGAAAAACCCATCATGCGTTTATTGTTTTCGGCGATGATTATCAGCCGGTTTATATTTCGGTGACGCGGAAGGAGTGGCAGGTAAAGCCTTATGTTGAGGCTAAAAAAGCGGAAGAAGAAAAAAAACGTCAGGGTGTTAAGGATAAAGGTCATAGTTACCACCCTGAACCAGATGTTGAAGAAATTAAAGGGTTGGGGGAATTAAAACCAGGTAAAAAGAAAACGCCTAAACAAGGTGGTGCAGGTAAACGCGCACGCTGGGTTGGGGATAAAGGCCGTAAAATCTACGAGTGGGACTATCAGCACGGTGAGCTGGAGGGGTATAGAGCCAGTGACGGCCAGCATCTTGGAGCATTTGACCCGAAAACGGGCAAACAACTGAAACCCGCTGATCCGGAACGTAATATCAAAAAATATTTATAAGGAGATAACATCATGGGATTGAAAGTACATTTACAATGGTTTGATAAAAA