Orthogroup:group_2667



Homologs in group_2667

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_04735 FBDBKF_04735 Morganella morganii S1 - Colicin-E3
EHELCC_06025 EHELCC_06025 Morganella morganii S2 - Colicin-E3
NLDBIP_06345 NLDBIP_06345 Morganella morganii S4 - Colicin-E3
LHKJJB_03225 LHKJJB_03225 Morganella morganii S3 - Colicin-E3
HKOGLL_06700 HKOGLL_06700 Morganella morganii S5 - Colicin-E3
F4V73_RS04520 F4V73_RS04520 Morganella psychrotolerans - colicin-like bacteriocin tRNase domain-containing protein

Distribution of group_2667 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_2667 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_2667

Orthogroup content: 6 members

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This page summarizes the annotation of all members of the orthologous group group_2667.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 6

Product

# Product Occurence
1 Colicin-E3 5
2 colicin-like bacteriocin tRNase domain-containing protein 1

Pfam domain Annotation(s)

Domain ID Occurences Description
PF03515 6 Colicin-like bacteriocin tRNase domain
PF06958 1 S-type Pyocin
PF09000 5 Cytotoxic

Annotations of the 7 SwissProt hits

Annotation Number of occurrences
Cloacin 1
Colicin E3 1
Colicin-D 1
Colicin-E2 1
Colicin-E6 1
Colicin-E7 1
Colicin-E9 1

Protein length

Min length 250
Max length 830
Mean length (sd) 346.7 (236.8)
Median length 250.0

Protein length distribution