Homologs in group_2693

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_06025 EHELCC_06025 100.0 Morganella morganii S2 - Colicin-E3
NLDBIP_06345 NLDBIP_06345 100.0 Morganella morganii S4 - Colicin-E3
LHKJJB_03225 LHKJJB_03225 100.0 Morganella morganii S3 - Colicin-E3
HKOGLL_06700 HKOGLL_06700 100.0 Morganella morganii S5 - Colicin-E3
F4V73_RS04520 F4V73_RS04520 35.0 Morganella psychrotolerans - colicin-like bacteriocin tRNase domain-containing protein

Distribution of the homologs in the orthogroup group_2693

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2693

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P17999 8.25e-51 177 71 1 121 3 None Colicin-E6 Escherichia coli
P00646 9.74e-49 171 76 0 103 1 ceaC Colicin E3 Escherichia coli
P00645 2.02e-47 168 77 0 103 3 ccl Cloacin Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_04735
Feature type CDS
Gene -
Product Colicin-E3
Location 150037 - 150789 (strand: 1)
Length 753 (nucleotides) / 250 (amino acids)
In genomic island -

Contig

Accession contig_4
Length 199551 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2693
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF03515 Colicin-like bacteriocin tRNase domain
PF09000 Cytotoxic

Protein Sequence

MVVTLPSELVTTVKPADIRGQKTVPAMVVAQGVVDAVKQEHTVALTMAENTDIPVITAQKTKKPNVYTAEVVPGMKPLRIRMVSPSGKQVPPSKSVELPAAEHYLPQPDSGKTHHAFIVFGDDYQPVYISVTRKEWQVKPYVEAKKAEEEKKRQGVKDKGHSYHPEPDVEEIKGLGELKPGKKKTPKQGGAGKRARWVGDKGRKIYEWDYQHGELEGYRASDGQHLGAFDPKTGKQLKPADPERNIKKYL

Flanking regions ( +/- flanking 50bp)

CCCTTATTGATTTAAACCGTGCGAAACTTGTCGATATGAGGCAGGCGGATATGGTTGTCACGCTGCCGTCTGAACTAGTCACCACGGTAAAACCGGCAGACATCAGGGGACAAAAAACGGTTCCCGCAATGGTTGTGGCACAGGGTGTGGTGGATGCCGTTAAGCAGGAGCACACGGTTGCACTCACAATGGCGGAAAATACGGATATTCCGGTCATCACGGCACAAAAAACGAAGAAACCGAATGTGTATACCGCAGAGGTTGTCCCGGGTATGAAGCCGCTGCGGATAAGAATGGTGTCACCATCAGGTAAGCAGGTTCCCCCCTCAAAAAGTGTGGAACTTCCGGCCGCAGAGCATTATCTTCCTCAGCCGGACAGCGGAAAAACCCATCATGCGTTTATTGTTTTCGGCGATGATTATCAGCCGGTTTATATTTCGGTGACGCGGAAGGAGTGGCAGGTAAAGCCTTATGTTGAGGCTAAAAAAGCGGAAGAAGAAAAAAAACGTCAGGGTGTTAAGGATAAAGGTCATAGTTACCACCCTGAACCAGATGTTGAAGAAATTAAAGGGTTGGGGGAATTAAAACCAGGTAAAAAGAAAACGCCTAAACAAGGTGGTGCAGGTAAACGCGCACGCTGGGTTGGGGATAAAGGCCGTAAAATCTACGAGTGGGACTATCAGCACGGTGAGCTGGAGGGGTATAGAGCCAGTGACGGCCAGCATCTTGGAGCATTTGACCCGAAAACGGGCAAACAACTGAAACCCGCTGATCCGGAACGTAATATCAAAAAATATTTATAAGGAGATAACATCATGGGATTGAAAGTACATTTACAATGGTTTGATAAAAA