Homologs in group_1576

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10215 FBDBKF_10215 100.0 Morganella morganii S1 yfiM YfiM family lipoprotein
EHELCC_05015 EHELCC_05015 100.0 Morganella morganii S2 yfiM YfiM family lipoprotein
LHKJJB_13615 LHKJJB_13615 100.0 Morganella morganii S3 yfiM YfiM family lipoprotein
HKOGLL_12920 HKOGLL_12920 100.0 Morganella morganii S5 yfiM YfiM family lipoprotein
F4V73_RS00115 F4V73_RS00115 78.8 Morganella psychrotolerans - YfiM family lipoprotein
PMI_RS01950 PMI_RS01950 51.3 Proteus mirabilis HI4320 - YfiM family lipoprotein

Distribution of the homologs in the orthogroup group_1576

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1576

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P46126 4.33e-34 116 59 1 96 4 yfiM Uncharacterized protein YfiM Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_05015
Feature type CDS
Gene yfiM
Product YfiM family lipoprotein
Location 330439 - 330780 (strand: 1)
Length 342 (nucleotides) / 113 (amino acids)

Contig

Accession ZDB_520
Length 336657 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1576
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF10043 Predicted periplasmic lipoprotein (DUF2279)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5544 Function unknown (S) S Uncharacterized conserved protein YfiM, DUF2279 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K05811 putative lipoprotein - -

Protein Sequence

MPVTLRTCMTVSFCLLLSSGCSMHLANDSWTGRDKARHFAFSAATAIAANAYGDHQNWQHRHSAQFGIGFSVALGAAKEFYDSRPGGTGWSVKDFVWDIAGAVAGYSVYQSLK

Flanking regions ( +/- flanking 50bp)

ACCTCCCGGCACCCGCCGGGATTTTTTTATCTGTTTCCCGGAGAATGAGTATGCCCGTTACATTACGTACCTGCATGACAGTGTCTTTCTGCCTGCTGCTGAGTTCCGGCTGTTCGATGCACCTTGCTAATGACAGCTGGACCGGACGGGATAAAGCCCGGCATTTCGCCTTTTCAGCTGCAACCGCAATTGCCGCTAATGCTTATGGCGATCACCAGAACTGGCAGCACCGGCACAGTGCACAATTCGGTATCGGTTTTTCTGTTGCGCTGGGAGCCGCGAAAGAGTTTTATGACAGCCGCCCGGGCGGTACCGGCTGGAGTGTGAAAGATTTCGTCTGGGATATCGCCGGCGCCGTTGCCGGTTACAGTGTGTACCAATCGCTGAAATAAAAATCCGGTGACCGGGCAGTGTAAATTTTGTGAGCAACATCACATGCAAA