Homologs in group_1576

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10215 FBDBKF_10215 51.3 Morganella morganii S1 yfiM YfiM family lipoprotein
EHELCC_05015 EHELCC_05015 51.3 Morganella morganii S2 yfiM YfiM family lipoprotein
NLDBIP_05015 NLDBIP_05015 51.3 Morganella morganii S4 yfiM YfiM family lipoprotein
LHKJJB_13615 LHKJJB_13615 51.3 Morganella morganii S3 yfiM YfiM family lipoprotein
HKOGLL_12920 HKOGLL_12920 51.3 Morganella morganii S5 yfiM YfiM family lipoprotein
F4V73_RS00115 F4V73_RS00115 56.6 Morganella psychrotolerans - YfiM family lipoprotein

Distribution of the homologs in the orthogroup group_1576

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1576

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P46126 9e-34 115 51 1 103 4 yfiM Uncharacterized protein YfiM Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01950
Feature type CDS
Gene -
Product YfiM family lipoprotein
Location 458689 - 459036 (strand: -1)
Length 348 (nucleotides) / 115 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1576
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF10043 Predicted periplasmic lipoprotein (DUF2279)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5544 Function unknown (S) S Uncharacterized conserved protein YfiM, DUF2279 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K05811 putative lipoprotein - -

Protein Sequence

MKLKRNSFYLIVLLSLVTLNGCQSFHVANDNWQGKDKAQHFLFSMVASAGANAYADHQNYSYREGLVIGLSFSISLGVAKELYDSRPQGTGWSWHDFAYDVAGAAAGSLLYQQLK

Flanking regions ( +/- flanking 50bp)

AAGCTCAACTATCTAACGATCAAGATATAGTAATAAGGCGTGGATATTATATGAAACTAAAGCGTAATAGCTTCTATCTGATAGTTTTACTTTCACTCGTCACGTTAAATGGTTGTCAATCCTTTCATGTTGCCAATGATAATTGGCAAGGAAAAGATAAAGCACAGCATTTTTTATTTTCTATGGTAGCCTCCGCAGGAGCTAATGCTTACGCAGATCATCAGAACTATTCTTATCGAGAAGGATTAGTTATTGGCTTATCTTTTTCAATAAGTTTAGGCGTCGCTAAAGAGCTTTATGATAGTCGACCACAAGGTACAGGATGGAGCTGGCATGATTTTGCTTATGATGTGGCAGGAGCCGCGGCTGGCAGTTTACTCTATCAGCAATTGAAATAACTCTTTTCCTTAGTTAAAGGATAAAATTGAGAATAAAAAATATCAAACGC