Homologs in group_1553

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10065 FBDBKF_10065 100.0 Morganella morganii S1 ybgA DUF1722 domain-containing protein
EHELCC_04865 EHELCC_04865 100.0 Morganella morganii S2 ybgA DUF1722 domain-containing protein
LHKJJB_13765 LHKJJB_13765 100.0 Morganella morganii S3 ybgA DUF1722 domain-containing protein
HKOGLL_12770 HKOGLL_12770 100.0 Morganella morganii S5 ybgA DUF1722 domain-containing protein
F4V73_RS00270 F4V73_RS00270 66.5 Morganella psychrotolerans - YbgA family protein
PMI_RS02115 PMI_RS02115 41.6 Proteus mirabilis HI4320 - DUF1722 domain-containing protein

Distribution of the homologs in the orthogroup group_1553

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1553

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P24252 3.46e-14 69 33 1 121 4 ybgA Uncharacterized protein YbgA Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_04865
Feature type CDS
Gene ybgA
Product DUF1722 domain-containing protein
Location 297621 - 298148 (strand: -1)
Length 528 (nucleotides) / 175 (amino acids)

Contig

Accession ZDB_520
Length 336657 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1553
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF08349 Protein of unknown function (DUF1722)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3272 Function unknown (S) S Uncharacterized conserved protein YbgA, DUF1722 family

Protein Sequence

MTYQRQPESSDEDALWRQRARQELIQALNPPLSAGGLIRLHSRYKYALMAYSPQLYKSSGRLLSQAGKLSPAELAETAAVWQQALLTAFSQPATRANMTNALMHMQGYFKRLLSPAEKQQMSAAIETYRTGTGSAEAVKHLLLTTARHYQTDYLCDQAILQPVTAAQSHSGRSSV

Flanking regions ( +/- flanking 50bp)

AGTGCGATTTGTACTATAGTCACTCCGTAACAGATAAAAAGGCGGGAAATATGACATATCAGCGACAACCGGAAAGTAGCGATGAGGATGCACTGTGGCGGCAGAGGGCGCGGCAGGAACTGATTCAGGCACTGAATCCGCCGCTCAGTGCGGGCGGGCTGATCCGTCTGCACAGTCGTTACAAATATGCGCTGATGGCATATTCACCACAGTTATATAAAAGCAGCGGACGGCTGTTGTCACAGGCAGGAAAACTTTCCCCGGCGGAACTGGCGGAAACGGCGGCGGTCTGGCAGCAGGCGCTGCTTACCGCATTTTCACAGCCTGCGACCCGCGCTAATATGACCAATGCACTGATGCATATGCAGGGCTATTTCAAACGTTTACTGAGCCCGGCAGAAAAGCAGCAGATGAGTGCGGCGATTGAAACTTACCGAACCGGCACCGGCTCTGCGGAGGCGGTGAAACATCTGTTGCTCACCACTGCCCGCCACTATCAGACAGATTATCTGTGTGATCAGGCAATACTGCAGCCGGTAACAGCGGCTCAGTCACACTCCGGGCGCAGCAGTGTGTAGCGGTCGCCCATATTCTCATAACCCCAGTCACACATCAGCAGCAGAATCGG