Orthogroup:group_1553


Homologs in group_1553

Help

7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_10065 FBDBKF_10065 Morganella morganii S1 ybgA DUF1722 domain-containing protein
EHELCC_04865 EHELCC_04865 Morganella morganii S2 ybgA DUF1722 domain-containing protein
NLDBIP_04865 NLDBIP_04865 Morganella morganii S4 ybgA DUF1722 domain-containing protein
LHKJJB_13765 LHKJJB_13765 Morganella morganii S3 ybgA DUF1722 domain-containing protein
HKOGLL_12770 HKOGLL_12770 Morganella morganii S5 ybgA DUF1722 domain-containing protein
F4V73_RS00270 F4V73_RS00270 Morganella psychrotolerans - YbgA family protein
PMI_RS02115 PMI_RS02115 Proteus mirabilis HI4320 - DUF1722 domain-containing protein

Distribution of group_1553 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_1553 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_1553

Orthogroup content: 7 members

Help

This page summarizes the annotation of all members of the orthologous group group_1553.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 ybgA 5
2 - 2

Product

# Product Occurence
1 DUF1722 domain-containing protein 6
2 YbgA family protein 1

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3272 7 S Function unknown (S) Uncharacterized conserved protein YbgA, DUF1722 family

Pfam domain Annotation(s)

Domain ID Occurences Description
PF08349 7 Protein of unknown function (DUF1722)

Annotations of the 1 SwissProt hits

Annotation Number of occurrences
Uncharacterized protein YbgA 1

Protein length

Min length 171
Max length 251
Mean length (sd) 185.3 (29.0)
Median length 175.0

Protein length distribution