Homologs in group_493

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10065 FBDBKF_10065 66.5 Morganella morganii S1 ybgA DUF1722 domain-containing protein
EHELCC_04865 EHELCC_04865 66.5 Morganella morganii S2 ybgA DUF1722 domain-containing protein
NLDBIP_04865 NLDBIP_04865 66.5 Morganella morganii S4 ybgA DUF1722 domain-containing protein
LHKJJB_13765 LHKJJB_13765 66.5 Morganella morganii S3 ybgA DUF1722 domain-containing protein
HKOGLL_12770 HKOGLL_12770 66.5 Morganella morganii S5 ybgA DUF1722 domain-containing protein
PMI_RS02115 PMI_RS02115 40.1 Proteus mirabilis HI4320 - DUF1722 domain-containing protein

Distribution of the homologs in the orthogroup group_493

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_493

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P24252 2.52e-12 64 30 2 141 4 ybgA Uncharacterized protein YbgA Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00270
Feature type CDS
Gene -
Product YbgA family protein
Location 65250 - 65765 (strand: 1)
Length 516 (nucleotides) / 171 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_493
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF08349 Protein of unknown function (DUF1722)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3272 Function unknown (S) S Uncharacterized conserved protein YbgA, DUF1722 family

Protein Sequence

MTYRDVPDGKWSLPDDEALTLQPPVRAAALIRLQSRYKYALMAYSPALYKTTGRLLAQAGTLSPAALCDTAETWTQSLVSAFSQPATRANMTNALMHMQGYFKRLLTTEEKQQMTDMILAYRQGTDSPEAAKAMLLHYAQLHDVRYLCDQALLQPVTADECGQSHSGLSRV

Flanking regions ( +/- flanking 50bp)

CCACCCGGTTTTGTACTATTATTATGTTTTACAGGCAAGGGAGATGGAAAATGACATACCGGGACGTTCCTGACGGCAAATGGTCACTGCCGGACGATGAGGCACTGACTCTGCAACCTCCGGTCCGCGCCGCAGCGCTTATCCGCCTCCAGAGCCGCTATAAATATGCACTGATGGCATATTCTCCCGCGTTATATAAAACAACAGGACGTTTACTGGCTCAGGCGGGAACCTTATCACCGGCAGCGCTGTGCGATACAGCAGAAACCTGGACGCAGTCATTAGTGAGTGCATTTTCACAGCCGGCGACCCGCGCTAATATGACCAATGCACTGATGCATATGCAGGGCTATTTTAAGCGTTTGCTGACAACGGAAGAAAAACAGCAGATGACAGACATGATCCTGGCTTACCGGCAGGGAACCGATTCGCCGGAGGCAGCAAAAGCGATGCTGCTGCATTACGCACAGCTCCATGATGTCCGCTATTTGTGTGATCAGGCGCTGTTACAACCGGTGACAGCAGATGAGTGCGGTCAGTCACACTCAGGTCTGAGCAGAGTATAGCGGTCACCCATATTGTTATATCCCCAGTCACACATCAGCATCAGAATGGG