COG3272


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3272, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 11 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized conserved protein YbgA, DUF1722 family
Function(s) descr. Function unknown (S)

Occurence in the database

COG3272 is associated with 11 different proteins (see tab "Protein list" and "Profile")
The 11 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1553 FBDBKF_10065 105860 106387 -1 ybgA DUF1722 domain-containing protein Morganella morganii S1
1 group_3661 FBDBKF_12840 73323 74318 -1 Uncharacterized conserved protein Morganella morganii S1
2 group_1553 EHELCC_04865 297825 298352 -1 ybgA DUF1722 domain-containing protein Morganella morganii S2
3 group_1553 NLDBIP_04865 297621 298148 -1 ybgA DUF1722 domain-containing protein Morganella morganii S4
4 group_3661 NLDBIP_19065 3749 4744 -1 Uncharacterized conserved protein Morganella morganii S4
5 group_1553 LHKJJB_13765 37230 37757 1 ybgA DUF1722 domain-containing protein Morganella morganii S3
6 group_3661 LHKJJB_18955 3749 4744 -1 Uncharacterized conserved protein Morganella morganii S3
7 group_1553 HKOGLL_12770 106641 107168 -1 ybgA DUF1722 domain-containing protein Morganella morganii S5
8 group_1553 F4V73_RS00270 65250 65765 1 YbgA family protein Morganella psychrotolerans
9 group_1553 PMI_RS02115 496531 497286 1 DUF1722 domain-containing protein Proteus mirabilis HI4320
10 group_3661 PMI_RS04805 1056469 1057464 1 DUF523 and DUF1722 domain-containing protein Proteus mirabilis HI4320