Homologs in group_166

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8 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01360 FBDBKF_01360 100.0 Morganella morganii S1 impA ImpA N-terminal domain-containing protein
EHELCC_00185 EHELCC_00185 100.0 Morganella morganii S2 impA ImpA N-terminal domain-containing protein
LHKJJB_04790 LHKJJB_04790 100.0 Morganella morganii S3 impA ImpA N-terminal domain-containing protein
HKOGLL_02255 HKOGLL_02255 100.0 Morganella morganii S5 impA ImpA N-terminal domain-containing protein
F4V73_RS02310 F4V73_RS02310 68.3 Morganella psychrotolerans - VasL domain-containing protein
F4V73_RS16725 F4V73_RS16725 29.0 Morganella psychrotolerans - VasL domain-containing protein
F4V73_RS16750 F4V73_RS16750 22.7 Morganella psychrotolerans tssA type VI secretion system protein TssA
PMI_RS03615 PMI_RS03615 44.9 Proteus mirabilis HI4320 - VasL domain-containing protein

Distribution of the homologs in the orthogroup group_166

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_166

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_03275
Feature type CDS
Gene impA
Product ImpA N-terminal domain-containing protein
Location 638757 - 640112 (strand: 1)
Length 1356 (nucleotides) / 451 (amino acids)
In genomic island -

Contig

Accession ZDB_519
Length 680340 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_166
Orthogroup size 9
N. genomes 7

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Genomic region

Domains

PF06812 ImpA, N-terminal, type VI secretion system
PF12486 Type VI secretion system, EvfB, or VasL

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3515 Intracellular trafficking, secretion, and vesicular transport (U) U Type VI protein secretion system component TssA1/VasJ/EvfE, contains ImpA_N domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K11911 type VI secretion system protein VasL - -

Protein Sequence

MTGLNMDGIIIRTGTSPLDLPEFAEIREEINKLSHPSQPEVSWSRVEAKSLALFRKNGVDLQTAVYYTLARLHRNGLAGLTEGSELIAMMVVHDWDAVWPPQINHRIDILNWFITRAMAAVRRLTFSRDDLRLLYRAERALQLITERLTQTPSGKTPVTDNLQFYFRNAAKEIEQPSPAADHELPAVTVAPLVYIAEESPAVSGTDAVSAGVAGHSTVRIVQVAAETPPVPRKTFPFAGFAAGLITGLIITAVLFFTVYKPVKDELDTFSAQPGSAPVLWFANPQLATYGQFLADAEQQSPIAPLLLTEKMTDIARQRWPNDPDQAYATRHWQDVLQTRIADVAQTDSWYLTNERLQALSDTIVAREKDRGSFTLSYLKTEIYSIQQAHSKTVPAEEYLRALSDDIRNGKPVSAAQLHRIDQQLNGLTALYADLQKQAEQAGLKPGSGKQE

Flanking regions ( +/- flanking 50bp)

TTCTCCGGCAATCTGTTCTCCCGTTTCAGCCTGCCTGAAACACTGTATTAATGACGGGGCTGAATATGGACGGCATTATTATCCGGACAGGCACTTCTCCGCTGGATTTACCGGAGTTCGCGGAAATCCGGGAAGAGATCAACAAACTCAGCCACCCGTCACAGCCGGAAGTCAGCTGGTCGCGGGTGGAAGCAAAATCCCTGGCTCTGTTCCGGAAAAACGGCGTGGATTTGCAGACGGCGGTCTACTACACCCTCGCCCGCCTGCACCGCAACGGCCTGGCCGGGCTGACGGAAGGCAGCGAACTGATTGCCATGATGGTGGTTCATGACTGGGATGCAGTGTGGCCGCCGCAAATCAATCACCGCATTGATATTCTTAACTGGTTTATCACGCGGGCAATGGCCGCAGTGCGGCGTCTTACCTTCAGCCGTGATGACCTGCGCCTGCTCTACCGGGCAGAGCGGGCGTTACAGCTGATCACCGAACGGCTGACACAGACACCGTCCGGTAAAACGCCGGTCACGGACAACCTGCAATTTTACTTCCGCAATGCCGCCAAAGAGATTGAACAACCGTCTCCGGCGGCGGATCATGAACTGCCGGCGGTCACTGTCGCCCCGCTGGTCTATATCGCGGAAGAAAGCCCGGCCGTTTCCGGAACCGATGCGGTTTCTGCCGGGGTCGCGGGGCACAGCACCGTCCGCATTGTGCAGGTCGCGGCAGAAACTCCGCCGGTACCGCGCAAAACATTCCCGTTTGCCGGGTTTGCGGCCGGTCTGATCACCGGACTGATTATCACCGCCGTGTTGTTCTTCACGGTCTATAAACCAGTGAAAGATGAGCTGGATACCTTCTCCGCGCAACCCGGCAGTGCGCCGGTGCTGTGGTTTGCCAACCCGCAGCTTGCCACCTACGGACAGTTTCTGGCCGATGCGGAACAGCAGTCCCCGATCGCCCCGCTGCTTCTGACAGAGAAAATGACTGACATTGCCCGCCAGCGCTGGCCGAATGATCCGGATCAGGCCTATGCCACCCGCCACTGGCAGGATGTATTACAGACCCGGATTGCCGATGTGGCACAAACGGACAGCTGGTATCTCACCAATGAACGGTTGCAGGCACTGTCCGACACCATTGTCGCGAGAGAAAAAGATCGTGGCAGCTTTACCCTGTCCTATCTGAAAACTGAAATCTACAGCATTCAGCAGGCTCACTCAAAAACCGTCCCGGCAGAAGAATATCTGCGTGCGTTGTCTGACGATATCCGCAACGGTAAACCGGTATCAGCGGCACAGCTGCACCGGATTGATCAGCAGCTTAACGGCCTGACCGCACTCTATGCGGACTTACAGAAACAGGCGGAACAGGCAGGTCTGAAACCCGGCAGCGGCAAACAGGAATAAGGAAAAAATTATGGCGAACATGATCTATTTAAGTGTTAACGGCAACCAGC