Homologs in group_166

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8 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01360 FBDBKF_01360 22.7 Morganella morganii S1 impA ImpA N-terminal domain-containing protein
EHELCC_00185 EHELCC_00185 22.7 Morganella morganii S2 impA ImpA N-terminal domain-containing protein
NLDBIP_03275 NLDBIP_03275 22.7 Morganella morganii S4 impA ImpA N-terminal domain-containing protein
LHKJJB_04790 LHKJJB_04790 22.7 Morganella morganii S3 impA ImpA N-terminal domain-containing protein
HKOGLL_02255 HKOGLL_02255 22.7 Morganella morganii S5 impA ImpA N-terminal domain-containing protein
F4V73_RS02310 F4V73_RS02310 23.5 Morganella psychrotolerans - VasL domain-containing protein
F4V73_RS16725 F4V73_RS16725 20.2 Morganella psychrotolerans - VasL domain-containing protein
PMI_RS03615 PMI_RS03615 23.8 Proteus mirabilis HI4320 - VasL domain-containing protein

Distribution of the homologs in the orthogroup group_166

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_166

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16750
Feature type CDS
Gene tssA
Product type VI secretion system protein TssA
Location 172757 - 174364 (strand: -1)
Length 1608 (nucleotides) / 535 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000006
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_166
Orthogroup size 9
N. genomes 7

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Genomic region

Domains

PF06812 ImpA, N-terminal, type VI secretion system
PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3515 Intracellular trafficking, secretion, and vesicular transport (U) U Type VI protein secretion system component TssA1/VasJ/EvfE, contains ImpA_N domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K11910 type VI secretion system protein VasJ - -

Protein Sequence

MNVLNTLSSACFADNPDEPARIAQQEIARWDAWLLPVSAESPAGSDPGYDDDFERMREEVNKLSGADTELICTLAEKLLMTVCKDVRVATYYLWARLHKEGGKGLADALALLAGMLIQYQDTLLPERTNSRKAAIEWLAGQRVLDSLSLYPEVERQEFSRAVALLISIQQTLDTRGDIGDPELGPLYSALEKRLALSGGADSVVPQNISSEPARNANTAGLVPGRGSQVQSGRELLDQAKSLAMYLRSQSDGWLAGHRLMKTVRWDTLHQLPPQNHQGCTRLSPPRTEARAQLKRLYLQQSWGELTEQADRLFAEGVNHFWLDVQWYLYQALSKSPSPRDGWADVIKADLKLFLTRLPGLEMLAWEDGTPFADEVTLGWINQQILEESNFPAAGFHPPTEQTDEHSVLALEQEALAQADSEGIEAALRWLQSRPDTGSPRNQWLLHLVMARVADQFARYDLALNLLRDLDCRAAGITLACWEPQYLFEIKARQLQLLRGKSQRSGAGKAGTSPEMEALLAELTALDPVRAAILYP

Flanking regions ( +/- flanking 50bp)

TCATTGCTGATGGCAACGCAGAAAAAATAACGGAGTAATAGCAGAATCTCATGAATGTACTGAATACTTTATCTTCAGCTTGTTTTGCGGATAACCCGGATGAACCGGCGCGGATTGCCCAGCAGGAAATAGCCCGGTGGGATGCCTGGTTATTGCCTGTCAGTGCAGAGTCACCTGCGGGCAGCGACCCTGGTTATGACGATGATTTTGAACGGATGCGGGAGGAGGTGAATAAACTCTCCGGCGCAGACACCGAATTAATTTGTACGCTGGCAGAAAAACTGCTGATGACAGTATGCAAAGATGTGCGGGTTGCCACCTATTACCTCTGGGCGCGCCTGCATAAAGAGGGCGGAAAGGGCCTGGCTGATGCACTGGCGTTACTGGCCGGCATGCTTATTCAGTATCAGGATACACTCCTGCCTGAGCGGACCAACAGCCGGAAAGCCGCTATTGAGTGGCTTGCCGGGCAGAGGGTGCTGGACAGCCTGTCACTGTACCCGGAAGTGGAACGACAGGAATTTTCCCGTGCGGTTGCCTTACTGATATCGATTCAGCAGACATTGGATACCCGGGGTGATATCGGCGATCCTGAGCTTGGCCCGTTATACAGCGCGCTGGAAAAACGCCTCGCACTTTCCGGCGGTGCGGATTCAGTTGTGCCGCAAAATATCAGCAGCGAACCTGCCCGTAATGCCAATACCGCGGGGTTAGTGCCCGGAAGAGGCAGTCAGGTGCAATCCGGGCGTGAGTTGCTGGATCAGGCAAAATCACTGGCAATGTATCTGCGCAGCCAGTCCGATGGCTGGCTCGCCGGGCACCGGCTGATGAAAACAGTGCGCTGGGATACGCTGCATCAGTTGCCGCCTCAGAATCACCAGGGCTGCACCCGGTTGTCCCCGCCGCGTACTGAAGCCCGCGCACAGCTTAAACGTCTGTATCTTCAGCAAAGTTGGGGCGAGCTGACGGAACAGGCGGATCGCCTGTTTGCCGAGGGTGTGAATCATTTCTGGCTGGATGTTCAGTGGTATCTGTATCAGGCGCTGAGTAAATCACCTTCCCCCCGTGACGGCTGGGCTGATGTTATCAAAGCCGATTTAAAGCTGTTTCTGACACGTCTGCCGGGGCTGGAAATGCTTGCCTGGGAAGATGGTACGCCGTTTGCGGATGAAGTGACACTTGGCTGGATCAACCAGCAGATACTGGAGGAAAGCAATTTCCCGGCGGCAGGATTTCACCCGCCAACTGAGCAGACAGATGAACATTCCGTGCTTGCTCTGGAGCAGGAAGCGCTGGCACAGGCTGACAGTGAGGGCATTGAAGCCGCTCTCCGCTGGTTACAGAGCCGGCCGGATACCGGTTCGCCGCGTAACCAGTGGTTACTGCATCTGGTCATGGCAAGGGTGGCGGATCAGTTTGCCCGTTATGACCTGGCACTGAACCTGCTGCGGGACTTAGATTGCCGGGCTGCGGGTATCACACTCGCCTGCTGGGAGCCGCAGTATCTGTTTGAAATTAAAGCCCGTCAGTTACAGTTGCTGCGCGGCAAAAGCCAGCGCAGCGGTGCCGGAAAAGCAGGGACTTCGCCGGAAATGGAGGCATTACTGGCTGAATTGACCGCACTGGATCCTGTTCGTGCCGCAATTTTATATCCCTGATCATTATTCAACGGACTAAGGTAATTTATTGATGGACGATCTTACTCTCC