Homologs in group_27

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15 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00045 FBDBKF_00045 52.3 Morganella morganii S1 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
FBDBKF_11500 FBDBKF_11500 52.3 Morganella morganii S1 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
FBDBKF_13045 FBDBKF_13045 98.3 Morganella morganii S1 - Phage tail protein
EHELCC_01500 EHELCC_01500 52.3 Morganella morganii S2 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
EHELCC_17715 EHELCC_17715 52.3 Morganella morganii S2 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
NLDBIP_01960 NLDBIP_01960 52.3 Morganella morganii S4 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
NLDBIP_05045 NLDBIP_05045 52.3 Morganella morganii S4 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
NLDBIP_19910 NLDBIP_19910 100.0 Morganella morganii S4 - Phage tail protein
LHKJJB_00075 LHKJJB_00075 52.3 Morganella morganii S3 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
LHKJJB_19160 LHKJJB_19160 52.3 Morganella morganii S3 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
HKOGLL_00115 HKOGLL_00115 52.3 Morganella morganii S5 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
HKOGLL_06025 HKOGLL_06025 98.3 Morganella morganii S5 - Phage tail protein
HKOGLL_15305 HKOGLL_15305 52.3 Morganella morganii S5 - Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN metalloenzyme (JAMM) motif
F4V73_RS02235 F4V73_RS02235 81.3 Morganella psychrotolerans - NlpC/P60 family protein
F4V73_RS18170 F4V73_RS18170 37.2 Morganella psychrotolerans - C40 family peptidase

Distribution of the homologs in the orthogroup group_27

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_27

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P03729 6.26e-84 251 61 1 192 3 K Tail tip assembly protein K Escherichia phage lambda
O64333 5.17e-37 133 35 3 226 3 gene Tail tip assembly protein K Escherichia phage N15 19

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_19870
Feature type CDS
Gene -
Product Phage tail protein
Location 409 - 1137 (strand: -1)
Length 729 (nucleotides) / 242 (amino acids)

Contig

Accession ZDB_412
Length 1321 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_27
Orthogroup size 16
N. genomes 6

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Genomic region

Domains

PF00877 NlpC/P60 family
PF14464 Prokaryotic homologs of the JAB domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1310 Posttranslational modification, protein turnover, chaperones (O) O Proteasome lid subunit RPN8/RPN11, contains Jab1/MPN domain metalloenzyme (JAMM) motif

Protein Sequence

MIKHAILAHAQADAPRESCGLIIRNEQGEQYLPCRNQSPDPEHHFTVGFDDFIRAGEQGEVVAVVHSHPGGQPYLSSADRTTQINSGLPWLLVCDEKIHRYEPVPPLLGRQFVHGVTDCYSLFRDAYHLTGINLPDFERHDDWWRHGEELYLDNMESNGFVRVKKNIQPGDVILFCYASSRANHAAVYLGAQTILHHIPNQLSKREAYNPRWQRMTHSIWRYRHWQPSGFTGICNDLDAALI

Flanking regions ( +/- flanking 50bp)

GCATTTGTCTCCACTTCCCGTCTCAGCAAATAGTATTCCAGAGGGTTTCCATGATTAAACACGCCATTCTGGCGCACGCTCAGGCGGATGCGCCCCGGGAATCGTGCGGCCTGATTATCCGTAATGAGCAGGGGGAGCAGTATCTGCCGTGCCGGAATCAGTCTCCGGATCCTGAACACCATTTTACTGTCGGGTTTGACGATTTTATCCGTGCCGGTGAGCAGGGCGAGGTTGTGGCTGTGGTTCACAGTCACCCGGGCGGCCAGCCGTATCTGAGCAGTGCGGACAGGACCACGCAGATAAACAGCGGACTGCCGTGGCTGCTGGTCTGTGACGAAAAAATCCACCGATATGAACCGGTGCCGCCTCTGCTGGGCCGCCAGTTTGTGCACGGCGTGACCGACTGCTACAGCCTGTTCCGGGATGCATATCACCTGACAGGCATCAACCTGCCGGATTTTGAACGGCATGATGACTGGTGGCGGCACGGTGAAGAACTCTACCTGGACAATATGGAGAGCAACGGTTTTGTCCGGGTGAAAAAAAATATTCAGCCGGGGGATGTGATCCTGTTCTGTTACGCCAGTTCCCGGGCGAATCACGCCGCCGTTTATCTCGGCGCACAGACCATTCTCCACCACATACCCAATCAACTCAGTAAGCGCGAGGCATATAACCCACGATGGCAACGAATGACTCACTCGATCTGGCGTTACCGCCACTGGCAACCTTCCGGCTTTACGGGGATTTGCAACGATTTGGACGCCGCTTTGATCTGAGTGTCAGAACGGCTGCTGAAGGTATTCATGGGCTTCTGCTCCAGCTCCCG