Homologs in group_1501

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09685 FBDBKF_09685 100.0 Morganella morganii S1 ydiL Membrane protease YdiL, CAAX protease family
EHELCC_04485 EHELCC_04485 100.0 Morganella morganii S2 ydiL Membrane protease YdiL, CAAX protease family
NLDBIP_04485 NLDBIP_04485 100.0 Morganella morganii S4 ydiL Membrane protease YdiL, CAAX protease family
HKOGLL_12390 HKOGLL_12390 100.0 Morganella morganii S5 ydiL Membrane protease YdiL, CAAX protease family
F4V73_RS00655 F4V73_RS00655 77.2 Morganella psychrotolerans - CPBP family intramembrane glutamic endopeptidase
PMI_RS10820 PMI_RS10820 63.2 Proteus mirabilis HI4320 - type II CAAX endopeptidase family protein

Distribution of the homologs in the orthogroup group_1501

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1501

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_14145
Feature type CDS
Gene ydiL
Product Membrane protease YdiL, CAAX protease family
Location 106577 - 107395 (strand: -1)
Length 819 (nucleotides) / 272 (amino acids)

Contig

Accession ZDB_371
Length 143607 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1501
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF02517 Type II CAAX prenyl endopeptidase Rce1-like

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1266 Posttranslational modification, protein turnover, chaperones (O) O Membrane protease YdiL, CAAX protease family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07052 CAAX protease family protein - -

Protein Sequence

MTWLLLALSLLLLQFHRTLSLATLLAATISALFTGVMDWHALLTLWFAILLAVARPYTAPRSWQRVLLTLLVITVVPGLAFHLLPGFHNLRWIPPEAAGPHSPPYSFWFNADKALLPFVLIIIIPQLFVTAPLRRVTRLHWLLLAFSVPALLLLATALGGLGFEPHLPRWLPAFMLANLFFVSLAEEALFRGAIQQVLSRYLPPYAALFIAAAVFGLAHIAGGPLLVVFAGLAGVIYGLAWMWSGRLWVATGFHFALNLCHLLFFTWPFKVA

Flanking regions ( +/- flanking 50bp)

ACTTCTCTTTTACCCTGCTCACTCCTTTTCTGATTCTCTGACACAATTCCATGACCTGGCTTTTACTTGCATTATCTCTGCTGTTATTACAATTTCACCGGACACTGTCACTGGCAACACTTCTGGCTGCCACCATCAGCGCCCTGTTTACCGGTGTGATGGACTGGCATGCCCTGCTCACCCTGTGGTTTGCTATCCTTCTGGCTGTCGCACGGCCTTATACCGCACCACGCTCATGGCAGCGTGTACTGCTGACACTACTGGTGATCACCGTCGTGCCGGGTCTGGCTTTTCACTTGCTGCCGGGATTCCACAACCTGCGCTGGATACCGCCGGAGGCTGCCGGGCCGCACAGTCCGCCCTATTCTTTCTGGTTTAATGCCGATAAAGCACTGCTTCCGTTTGTGCTGATCATCATCATTCCGCAGCTGTTTGTCACCGCGCCGCTGCGCCGGGTCACCCGTCTGCACTGGCTGTTACTGGCTTTCTCCGTACCTGCACTATTGTTACTGGCAACCGCTCTTGGCGGACTGGGGTTTGAACCGCATCTGCCGCGCTGGCTGCCGGCGTTTATGCTGGCGAATCTGTTTTTTGTCTCCCTCGCAGAGGAAGCGCTGTTCCGGGGTGCTATTCAGCAGGTGCTTTCCCGGTATCTGCCGCCCTATGCCGCGCTGTTTATTGCAGCCGCTGTCTTCGGCCTGGCACATATTGCCGGAGGGCCGCTGCTGGTTGTCTTTGCCGGTCTGGCAGGGGTTATCTACGGGCTGGCCTGGATGTGGAGCGGACGGCTGTGGGTGGCGACAGGGTTTCACTTCGCACTGAACCTCTGCCATCTGCTGTTTTTTACCTGGCCGTTTAAGGTGGCGTAAAAAAACCGTTTTTTCCTGTGTATCACACTTTGCGTAAACATTTATAGCGG