COG1266


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1266, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Membrane protease YdiL, CAAX protease family
Function(s) descr. Posttranslational modification, protein turnover, chaperones (O)

Occurence in the database

COG1266 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1501 FBDBKF_09685 36222 37040 1 ydiL Membrane protease YdiL, CAAX protease family Morganella morganii S1
1 group_1501 EHELCC_04485 228187 229005 1 ydiL Membrane protease YdiL, CAAX protease family Morganella morganii S2
2 group_1501 NLDBIP_04485 227983 228801 1 ydiL Membrane protease YdiL, CAAX protease family Morganella morganii S4
3 group_1501 LHKJJB_14145 106577 107395 -1 ydiL Membrane protease YdiL, CAAX protease family Morganella morganii S3
4 group_1501 HKOGLL_12390 37003 37821 1 ydiL Membrane protease YdiL, CAAX protease family Morganella morganii S5
5 group_1501 F4V73_RS00655 135935 136753 -1 CPBP family intramembrane glutamic endopeptidase Morganella psychrotolerans
6 group_1501 PMI_RS10820 2383421 2384242 1 type II CAAX endopeptidase family protein Proteus mirabilis HI4320