Homologs in group_1501

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09685 FBDBKF_09685 63.2 Morganella morganii S1 ydiL Membrane protease YdiL, CAAX protease family
EHELCC_04485 EHELCC_04485 63.2 Morganella morganii S2 ydiL Membrane protease YdiL, CAAX protease family
NLDBIP_04485 NLDBIP_04485 63.2 Morganella morganii S4 ydiL Membrane protease YdiL, CAAX protease family
LHKJJB_14145 LHKJJB_14145 63.2 Morganella morganii S3 ydiL Membrane protease YdiL, CAAX protease family
HKOGLL_12390 HKOGLL_12390 63.2 Morganella morganii S5 ydiL Membrane protease YdiL, CAAX protease family
F4V73_RS00655 F4V73_RS00655 58.5 Morganella psychrotolerans - CPBP family intramembrane glutamic endopeptidase

Distribution of the homologs in the orthogroup group_1501

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1501

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS10820
Feature type CDS
Gene -
Product type II CAAX endopeptidase family protein
Location 2383421 - 2384242 (strand: 1)
Length 822 (nucleotides) / 273 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1501
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF02517 Type II CAAX prenyl endopeptidase Rce1-like

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1266 Posttranslational modification, protein turnover, chaperones (O) O Membrane protease YdiL, CAAX protease family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07052 CAAX protease family protein - -

Protein Sequence

MITWLLLALSLLLLGFHRKLALTTLAITTISAFITGVITWYVLPVILSLILLSCAYRHYKTNRLIATIVILAFIAIIVGLTFHFIPGFNNLRYIKHVPLGQYSPPFSFYFNADKALIPFILMIFIPTLFKTEPVKKANKYQWVLLAMAIPALLLFAMALGGLAIELHLPQWLPAFMLANIFFVSLAEEALFRGAIQQSLSRYLSPYLALFITAILFGLVHFAGGILLIIFASLAGIIYGLAWMWSGRLWVATLFHFALNLTHLLFFTYPFKIA

Flanking regions ( +/- flanking 50bp)

ATTACTATCTTTTAATCTAGCGTTTCCTTTTTATTTTTTTGTAGATAATTATGATCACTTGGTTACTTCTTGCTTTATCTTTATTGTTATTAGGGTTCCATCGCAAACTTGCACTTACTACTTTAGCTATAACCACCATTAGCGCATTTATAACAGGTGTTATCACTTGGTATGTACTTCCGGTTATATTGAGCTTGATTTTACTCTCTTGTGCATATCGCCATTACAAAACAAATCGTCTTATTGCCACTATTGTTATTCTTGCATTTATCGCCATTATTGTTGGGTTAACTTTTCATTTTATTCCTGGTTTTAATAACTTACGCTACATTAAACATGTTCCATTAGGGCAATATAGCCCCCCTTTCTCTTTTTATTTCAATGCCGATAAAGCATTAATCCCTTTTATTTTAATGATTTTTATTCCTACATTATTTAAAACAGAGCCAGTAAAAAAAGCCAATAAATATCAATGGGTTTTACTGGCTATGGCGATCCCCGCACTGTTATTATTCGCAATGGCATTGGGTGGACTCGCTATTGAATTACATTTGCCACAATGGCTACCCGCCTTTATGTTAGCAAATATTTTCTTTGTCTCTCTTGCTGAAGAAGCACTATTTAGAGGAGCCATACAGCAAAGTCTATCTCGCTATTTATCTCCCTATCTTGCGCTATTTATTACCGCTATTTTATTTGGGTTAGTCCATTTTGCCGGGGGGATATTACTCATTATCTTCGCCTCATTGGCAGGTATTATTTATGGCTTAGCGTGGATGTGGAGCGGTAGGCTTTGGGTTGCTACACTCTTTCATTTTGCACTGAATCTCACTCACCTGCTCTTTTTCACTTACCCTTTTAAAATCGCGTAAGTGCTATATTATTCTGCTGTATTTTAAGTTTTAGTCTTTCCGTCTCTTTA