Homologs in group_1501

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09685 FBDBKF_09685 77.2 Morganella morganii S1 ydiL Membrane protease YdiL, CAAX protease family
EHELCC_04485 EHELCC_04485 77.2 Morganella morganii S2 ydiL Membrane protease YdiL, CAAX protease family
NLDBIP_04485 NLDBIP_04485 77.2 Morganella morganii S4 ydiL Membrane protease YdiL, CAAX protease family
LHKJJB_14145 LHKJJB_14145 77.2 Morganella morganii S3 ydiL Membrane protease YdiL, CAAX protease family
HKOGLL_12390 HKOGLL_12390 77.2 Morganella morganii S5 ydiL Membrane protease YdiL, CAAX protease family
PMI_RS10820 PMI_RS10820 58.5 Proteus mirabilis HI4320 - type II CAAX endopeptidase family protein

Distribution of the homologs in the orthogroup group_1501

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1501

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS00655
Feature type CDS
Gene -
Product CPBP family intramembrane glutamic endopeptidase
Location 135935 - 136753 (strand: -1)
Length 819 (nucleotides) / 272 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1501
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02517 Type II CAAX prenyl endopeptidase Rce1-like

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1266 Posttranslational modification, protein turnover, chaperones (O) O Membrane protease YdiL, CAAX protease family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07052 CAAX protease family protein - -

Protein Sequence

MTWFLLILSLLLLQFHRTLSLAALLATTVSALFSGVMDWRALIALWGIIAIAIAYPRTHQRPWLRRGLALLVAATAAGLAFHLFPGFHNLHYLQPTQAGPHSAPFSFWLNADKALVPFVLLIIIPQLFVTIPQQRVTRLHWLLLILSVPALLLLATALGGLGFELHFPDWLPVFIVANLFLVSLAEEALFRGALQQVLSRRLPPYAALFIAAAVFGLVHIAGGPLLVVFAALAGVIYGLAWMWSGRLWVATLFHFSLNLCHLLFFTYPFRIG

Flanking regions ( +/- flanking 50bp)

CTTTTACCCTGACGGCTCTTTTTTACTTTTCTGATATCCGACGGATGTTCATGACCTGGTTTTTACTCATCTTATCTCTGCTTTTATTACAATTTCACCGGACACTGTCACTGGCAGCCCTGCTTGCCACCACGGTCAGTGCCTTGTTCAGCGGTGTAATGGACTGGCGCGCATTAATAGCGCTCTGGGGTATTATTGCTATCGCAATAGCCTATCCGCGCACACATCAGCGCCCGTGGCTGCGCCGTGGACTTGCATTGCTGGTTGCCGCTACCGCTGCCGGTCTTGCGTTTCACCTGTTTCCGGGATTTCATAACCTGCATTATCTGCAACCCACACAGGCAGGACCACACAGTGCGCCGTTTTCTTTCTGGCTCAATGCCGATAAAGCCCTGGTTCCGTTTGTTCTTCTGATTATCATCCCGCAACTGTTTGTGACCATACCACAGCAACGGGTAACACGATTGCACTGGCTCCTGCTGATACTGTCTGTTCCGGCACTTCTGCTGCTGGCTACAGCTTTAGGCGGATTAGGGTTTGAGCTGCATTTTCCTGACTGGCTGCCGGTCTTTATCGTGGCGAATCTCTTTTTGGTTTCACTGGCTGAAGAAGCGCTGTTCCGTGGTGCGCTTCAACAGGTGCTCTCCCGCCGGTTGCCGCCATATGCCGCGCTGTTTATTGCTGCCGCTGTTTTCGGGCTGGTACATATTGCAGGGGGCCCGCTGCTGGTCGTGTTTGCCGCACTCGCCGGGGTGATTTACGGGCTGGCCTGGATGTGGAGCGGAAGGTTGTGGGTCGCTACACTGTTTCATTTCAGTTTAAACCTGTGCCATTTGCTGTTTTTTACCTATCCTTTCAGGATTGGCTGAAAAAACCGTTTTCCTCCGGCTATTATACTTTGCGTAAACATTTATAGCGG