Homologs in group_764

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03515 FBDBKF_03515 100.0 Morganella morganii S1 rpoH RNA polymerase sigma factor RpoH
EHELCC_07020 EHELCC_07020 100.0 Morganella morganii S2 rpoH RNA polymerase sigma factor RpoH
NLDBIP_07345 NLDBIP_07345 100.0 Morganella morganii S4 rpoH RNA polymerase sigma factor RpoH
HKOGLL_04050 HKOGLL_04050 100.0 Morganella morganii S5 rpoH RNA polymerase sigma factor RpoH
F4V73_RS11385 F4V73_RS11385 96.5 Morganella psychrotolerans rpoH RNA polymerase sigma factor RpoH
PMI_RS17955 PMI_RS17955 87.6 Proteus mirabilis HI4320 rpoH RNA polymerase sigma factor RpoH

Distribution of the homologs in the orthogroup group_764

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_764

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P50509 1.81e-180 501 86 0 283 3 rpoH RNA polymerase sigma factor RpoH Proteus mirabilis
P50510 1.19e-161 453 80 1 285 3 rpoH RNA polymerase sigma factor RpoH Serratia marcescens
P11539 2.27e-161 452 78 0 284 3 rpoH RNA polymerase sigma factor RpoH Citrobacter freundii
P0AGB3 1.11e-160 451 77 0 284 1 rpoH RNA polymerase sigma factor RpoH Escherichia coli (strain K12)
P0AGB4 1.11e-160 451 77 0 284 3 rpoH RNA polymerase sigma factor RpoH Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AGB5 1.11e-160 451 77 0 284 3 rpoH RNA polymerase sigma factor RpoH Escherichia coli O157:H7
P50508 2.75e-155 437 78 2 286 3 rpoH RNA polymerase sigma factor RpoH Enterobacter cloacae
P44404 1.74e-153 432 74 3 282 3 rpoH RNA polymerase sigma factor RpoH Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P50511 1.47e-152 430 72 1 283 3 rpoH RNA polymerase sigma factor RpoH Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
O05385 4.11e-146 414 67 0 284 3 rpoH RNA polymerase sigma factor RpoH Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8DD54 1.57e-145 412 70 2 283 3 rpoH RNA polymerase sigma factor RpoH Vibrio vulnificus (strain CMCP6)
Q8KA76 7.77e-142 403 67 1 285 3 rpoH RNA polymerase sigma factor RpoH Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89B27 1.91e-137 392 68 3 277 3 rpoH RNA polymerase sigma factor RpoH Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P42378 2.59e-119 346 61 3 284 3 rpoH RNA polymerase sigma factor RpoH Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q07083 5.56e-66 211 42 4 273 3 sigC RNA polymerase sigma-C factor Myxococcus xanthus
B8H3C3 6.15e-64 205 39 3 281 3 rpoH RNA polymerase sigma factor RpoH Caulobacter vibrioides (strain NA1000 / CB15N)
P0CAW9 6.15e-64 205 39 3 281 1 rpoH RNA polymerase sigma factor RpoH Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
P50512 8.51e-64 205 41 5 292 3 rpoH RNA polymerase sigma factor RpoH Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
Q01624 5.39e-62 200 42 7 269 3 sigB RNA polymerase sigma-B factor Stigmatella aurantiaca (strain DW4/3-1)
P50507 9.2e-57 187 36 5 291 3 rpoH RNA polymerase sigma factor RpoH Rhizobium radiobacter
P19433 1.44e-47 162 40 6 235 3 sigB RNA polymerase sigma-B factor Myxococcus xanthus
O66381 6.44e-31 121 32 11 286 3 sigA RNA polymerase sigma factor SigA Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Q9KI19 1.21e-30 120 32 8 271 1 rpoS RNA polymerase sigma factor RpoS Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
O33662 2.19e-29 117 31 9 276 3 sigA RNA polymerase sigma factor SigA Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
P52328 2.47e-29 117 31 10 273 3 sigA RNA polymerase sigma factor SigA Bacillus sp.
P0A4J0 2.8e-29 117 31 9 277 3 sigA RNA polymerase sigma factor SigA Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
P0A4I9 2.8e-29 117 31 9 277 3 sigA RNA polymerase sigma factor SigA Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
P45684 9.69e-29 115 31 10 285 1 rpoS RNA polymerase sigma factor RpoS Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P52331 3.25e-28 114 29 8 282 3 sigA RNA polymerase sigma factor SigA Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Q92BQ6 3.28e-28 114 29 8 282 3 sigA RNA polymerase sigma factor SigA Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
P52329 6.27e-28 113 30 10 277 3 sigA RNA polymerase sigma factor SigA Enterococcus faecalis (strain ATCC 700802 / V583)
P06224 1.14e-27 112 28 8 282 1 sigA RNA polymerase sigma factor SigA Bacillus subtilis (strain 168)
P9WGI1 1.22e-27 114 29 9 306 1 sigA RNA polymerase sigma factor SigA Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGI0 1.22e-27 114 29 9 306 3 sigA RNA polymerase sigma factor SigA Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P0A603 1.22e-27 114 29 9 306 3 sigA RNA polymerase sigma factor SigA Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P58290 1.69e-27 112 30 9 277 3 sigA RNA polymerase sigma factor SigA (Fragment) Lactococcus lactis subsp. cremoris
Q04506 3.37e-27 112 30 9 277 3 sigA RNA polymerase sigma factor SigA Lactococcus lactis subsp. lactis (strain IL1403)
Q9ZMY3 9.67e-27 112 34 8 239 3 rpoD RNA polymerase sigma factor RpoD Helicobacter pylori (strain J99 / ATCC 700824)
P0A0I9 1.44e-26 110 28 8 273 3 sigA RNA polymerase sigma factor SigA Staphylococcus aureus (strain MW2)
Q6G905 1.44e-26 110 28 8 273 3 sigA RNA polymerase sigma factor SigA Staphylococcus aureus (strain MSSA476)
Q6GGD8 1.44e-26 110 28 8 273 3 sigA RNA polymerase sigma factor SigA Staphylococcus aureus (strain MRSA252)
P0A0I8 1.44e-26 110 28 8 273 3 sigA RNA polymerase sigma factor SigA Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HFJ9 1.44e-26 110 28 8 273 3 sigA RNA polymerase sigma factor SigA Staphylococcus aureus (strain COL)
P0A0J0 1.44e-26 110 28 8 273 1 sigA RNA polymerase sigma factor SigA Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q99TT5 1.68e-26 109 28 8 273 1 sigA RNA polymerase sigma factor SigA Staphylococcus aureus (strain N315)
P77994 2.51e-26 109 30 6 270 1 sigA RNA polymerase sigma factor SigA Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P55993 2.65e-26 111 34 8 239 1 rpoD RNA polymerase sigma factor RpoD Helicobacter pylori (strain ATCC 700392 / 26695)
Q8CP24 3.38e-26 108 27 7 279 3 sigA RNA polymerase sigma factor SigA Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HNY7 3.38e-26 108 27 7 279 3 sigA RNA polymerase sigma factor SigA Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
O51804 2.69e-25 105 29 8 275 3 rpoS RNA polymerase sigma factor RpoS Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P33118 2.91e-25 105 28 8 296 3 sigB RNA polymerase sigma factor SigB Corynebacterium diphtheriae (strain ATCC 700971 / NCTC 13129 / Biotype gravis)
P27785 3.22e-25 105 27 9 306 3 sigA RNA polymerase sigma factor SigA Kitasatospora aureofaciens
P77951 5.39e-25 107 28 7 301 1 sigA RNA polymerase sigma factor SigA Streptomyces griseus
B1VXR4 5.39e-25 107 28 7 301 2 hrdB RNA polymerase principal sigma factor HrdB Streptomyces griseus subsp. griseus (strain JCM 4626 / CBS 651.72 / NBRC 13350 / KCC S-0626 / ISP 5235)
P13445 9.01e-25 104 27 8 286 1 rpoS RNA polymerase sigma factor RpoS Escherichia coli (strain K12)
P0DM81 9.97e-25 104 27 8 286 3 rpoS RNA polymerase sigma factor RpoS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
F5ZTT9 9.97e-25 104 27 8 286 3 rpoS RNA polymerase sigma factor RpoS Salmonella typhimurium (strain ATCC 68169 / UK-1)
P0A2E6 9.97e-25 104 27 8 286 3 rpoS RNA polymerase sigma factor RpoS Salmonella typhi
D0ZVL4 9.97e-25 104 27 8 286 1 rpoS RNA polymerase sigma factor RpoS Salmonella typhimurium (strain 14028s / SGSC 2262)
P0A2E7 9.97e-25 104 27 8 286 3 rpoS RNA polymerase sigma factor RpoS Salmonella dublin
P35540 1.09e-24 104 27 8 286 3 rpoS RNA polymerase sigma factor RpoS Shigella flexneri
P18183 1.58e-24 105 28 7 301 1 hrdB RNA polymerase principal sigma factor HrdB Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
P47765 2.56e-24 103 27 6 272 3 rpoS RNA polymerase sigma factor RpoS Yersinia enterocolitica
Q9Z7F0 2.52e-23 102 30 6 251 3 sigA RNA polymerase sigma factor SigA Chlamydia pneumoniae
Q9LD95 4.75e-23 101 29 8 238 1 SIGF RNA polymerase sigma factor sigF, chloroplastic Arabidopsis thaliana
P18249 6.37e-23 99 30 6 241 3 hrdD RNA polymerase principal sigma factor HrdD Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q60012 8.81e-23 99 30 6 242 3 hrdD RNA polymerase principal sigma factor HrdD Streptomyces viridifaciens
P9WGI5 2.75e-22 97 28 11 305 1 sigB RNA polymerase sigma factor SigB Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGI4 2.75e-22 97 28 11 305 3 sigB RNA polymerase sigma factor SigB Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P56835 2.95e-22 99 30 6 243 3 sigA RNA polymerase sigma factor SigA Chlamydia muridarum (strain MoPn / Nigg)
P18333 3.93e-22 99 30 6 243 1 sigA RNA polymerase sigma factor SigA Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
Q8PG33 4.91e-22 99 31 11 273 3 rpoD RNA polymerase sigma factor RpoD Xanthomonas axonopodis pv. citri (strain 306)
P33656 5.11e-22 97 29 8 285 3 sigA RNA polymerase sigma factor SigA Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Q59914 1.07e-21 95 29 7 264 3 hrdD RNA polymerase principal sigma factor HrdD Streptomyces griseus
P18184 1.08e-21 96 29 7 272 3 hrdC RNA polymerase principal sigma factor HrdC Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q31QR8 1.26e-21 95 28 9 289 3 sigA4 RNA polymerase sigma factor SigA4 Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
Q8P4H2 1.3e-21 97 30 11 273 3 rpoD RNA polymerase sigma factor RpoD Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
P52322 3.08e-21 95 28 5 242 3 sigA RNA polymerase sigma factor SigA Microcystis aeruginosa
P26683 3.53e-21 95 28 4 239 1 sigA RNA polymerase sigma factor SigA Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
P74565 1.49e-20 94 29 8 240 1 sigA RNA polymerase sigma factor SigA Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q87DT7 2.69e-20 94 29 9 257 3 rpoD RNA polymerase sigma factor RpoD Xylella fastidiosa (strain Temecula1 / ATCC 700964)
Q9PDM9 2.8e-20 94 29 9 257 3 rpoD RNA polymerase sigma factor RpoD Xylella fastidiosa (strain 9a5c)
P18182 3.24e-20 92 27 11 296 1 hrdA RNA polymerase principal sigma factor HrdA Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
P38023 6.34e-20 92 27 4 239 3 sigA1 RNA polymerase sigma factor SigA1 Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P43766 8.52e-20 92 29 9 242 3 rpoD RNA polymerase sigma factor RpoD Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57163 1.34e-19 92 28 9 261 3 rpoD RNA polymerase sigma factor RpoD Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
P0A2E3 1.39e-19 91 28 7 259 3 rpoD RNA polymerase sigma factor RpoD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2E4 1.39e-19 91 28 7 259 3 rpoD RNA polymerase sigma factor RpoD Salmonella typhi
P59117 1.49e-19 91 28 10 284 3 rpoD RNA polymerase sigma factor RpoD Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601)
P61540 1.49e-19 91 28 10 284 3 rpoD RNA polymerase sigma factor RpoD Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130)
P52325 1.5e-19 91 30 8 259 3 rpoD RNA polymerase sigma factor RpoD Neisseria gonorrhoeae
P00579 1.69e-19 91 28 7 259 1 rpoD RNA polymerase sigma factor RpoD Escherichia coli (strain K12)
P32001 2.02e-19 91 28 9 264 3 rpoD RNA polymerase sigma factor RpoD Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q83BB6 3.7e-19 90 30 7 241 1 rpoD RNA polymerase sigma factor RpoD Coxiella burnetii (strain RSA 493 / Nine Mile phase I)
Q9EZJ8 4.18e-19 89 28 8 259 1 sigA RNA polymerase sigma factor SigA Thermus aquaticus
O24744 5.18e-19 90 28 4 232 3 rpoD RNA polymerase sigma factor RpoD Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)
Q92FZ8 6.01e-19 90 28 7 243 3 rpoD RNA polymerase sigma factor RpoD Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q4UJT1 6.3e-19 90 28 7 243 3 rpoD RNA polymerase sigma factor RpoD Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
O83506 8.11e-19 89 27 7 240 3 rpoD RNA polymerase sigma factor RpoD Treponema pallidum (strain Nichols)
P33451 8.28e-19 89 28 7 243 3 rpoD RNA polymerase sigma factor RpoD Rickettsia prowazekii (strain Madrid E)
Q31QG5 8.65e-19 87 26 7 247 3 sigA3 RNA polymerase sigma factor SigA3 Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
Q68VQ5 8.68e-19 89 28 7 243 3 rpoD RNA polymerase sigma factor RpoD Rickettsia typhi (strain ATCC VR-144 / Wilmington)
D5AQI9 1.09e-18 89 28 7 236 3 rpoD RNA polymerase sigma factor RpoD Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
P26480 1.59e-18 88 28 6 235 1 rpoD RNA polymerase sigma factor RpoD Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P52326 1.83e-18 88 28 6 235 3 rpoD RNA polymerase sigma factor RpoD Pseudomonas protegens (strain DSM 19095 / LMG 27888 / CFBP 6595 / CHA0)
P52324 2.27e-18 88 28 7 235 3 rpoD RNA polymerase sigma factor RpoD Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
Q89B10 2.86e-18 87 28 6 237 3 rpoD RNA polymerase sigma factor RpoD Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
O22056 3.05e-18 87 26 8 266 2 SIGB RNA polymerase sigma factor sigB Arabidopsis thaliana
P26764 3.08e-18 85 28 8 266 3 sigF RNA polymerase sigma-F factor Bacillus licheniformis
P52323 3.14e-18 87 27 9 252 3 rpoD RNA polymerase sigma factor RpoD Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
P0CZ15 3.39e-18 87 27 8 245 2 rpoD RNA polymerase sigma factor RpoD Rhodobacter capsulatus
Q59996 4.39e-18 86 28 7 235 3 sigC Probable RNA polymerase sigma-C factor Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q59753 6.1e-18 87 28 7 234 3 rpoD RNA polymerase sigma factor RpoD Rhizobium meliloti (strain 1021)
P47491 6.72e-18 86 28 9 273 3 sigA RNA polymerase sigma factor SigA Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
Q2K619 7.5e-18 86 28 7 234 1 rpoD RNA polymerase sigma factor RpoD Rhizobium etli (strain ATCC 51251 / DSM 11541 / JCM 21823 / NBRC 15573 / CFN 42)
P33452 7.93e-18 86 28 7 234 3 rpoD RNA polymerase sigma factor RpoD Agrobacterium fabrum (strain C58 / ATCC 33970)
Q1RKH7 8.55e-18 86 27 7 243 3 rpoD RNA polymerase sigma factor RpoD Rickettsia bellii (strain RML369-C)
P33658 9.2e-18 84 27 7 262 3 sigG RNA polymerase sigma-G factor Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
P78022 1.19e-17 85 27 10 288 3 sigA RNA polymerase sigma factor SigA Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
P52327 1.3e-17 85 29 8 258 3 rpoD RNA polymerase sigma factor RpoD Pseudomonas putida
Q72L95 3.69e-17 84 27 8 259 1 sigA RNA polymerase sigma factor SigA Thermus thermophilus (strain ATCC BAA-163 / DSM 7039 / HB27)
P19940 1.32e-16 80 28 7 264 1 sigG RNA polymerase sigma-G factor Bacillus subtilis (strain 168)
P17531 1.8e-16 82 28 7 235 3 rpoD RNA polymerase sigma factor RpoD Myxococcus xanthus
Q31ME3 3.19e-16 80 27 7 241 1 sigA2 RNA polymerase sigma factor SigA2 Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
O24629 3.66e-16 81 28 8 242 1 SIGA RNA polymerase sigma factor sigA Arabidopsis thaliana
Q0J7T6 5.7e-16 80 27 8 247 2 SIGA RNA polymerase sigma factor sigA Oryza sativa subsp. japonica
Q03066 9.98e-16 80 26 5 244 3 sigC RNA polymerase sigma-C factor Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
P07860 3.46e-15 76 28 9 264 1 sigF RNA polymerase sigma-F factor Bacillus subtilis (strain 168)
P62179 1.04e-14 75 28 8 257 1 sigE RNA polymerase sigma-35 factor Bacillus thuringiensis subsp. kurstaki
P62178 1.04e-14 75 28 8 257 3 sigE RNA polymerase sigma-35 factor Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
P62177 1.04e-14 75 28 8 257 3 sigE RNA polymerase sigma-35 factor Bacillus anthracis
Q03065 1.42e-14 75 24 7 241 3 sigB RNA polymerase sigma-B factor Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
P35145 1.63e-14 74 28 8 255 3 sigF RNA polymerase sigma-F factor Priestia megaterium
P06222 2.14e-14 74 27 6 257 1 sigE RNA polymerase sigma-E factor Bacillus subtilis (strain 168)
P12254 1.26e-13 72 28 13 276 1 sigK RNA polymerase sigma-K factor Bacillus subtilis (strain 168)
Q9ZSL6 2.06e-13 73 25 6 239 2 SIGD RNA polymerase sigma factor sigD, chloroplastic Arabidopsis thaliana
P43344 7.63e-13 69 27 5 205 3 rpoD RNA polymerase sigma factor RpoD (Fragment) Serratia marcescens
P9WGI3 4.97e-12 67 26 6 235 1 sigF RNA polymerase sigma factor SigF Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WGI2 4.97e-12 67 26 6 235 3 sigF RNA polymerase sigma factor SigF Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
O24621 6.43e-12 68 26 7 252 2 SIGC RNA polymerase sigma factor sigC Arabidopsis thaliana
P33657 9.9e-12 66 36 1 97 3 sigE RNA polymerase sigma-E factor Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
P06574 1.15e-11 67 27 10 266 1 sigB RNA polymerase sigma-B factor Bacillus subtilis (strain 168)
P62181 1.04e-10 63 25 8 257 1 sigK RNA polymerase sigma-28 factor Bacillus thuringiensis subsp. kurstaki
P62180 1.04e-10 63 25 8 257 3 sigK RNA polymerase sigma-28 factor Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
P62182 1.04e-10 63 25 8 257 3 sigK RNA polymerase sigma-28 factor Bacillus anthracis
P37971 8.43e-10 61 25 7 232 3 sigF RNA polymerase sigma-F factor Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
P26768 2e-08 55 33 1 93 3 None Putative RNA polymerase sigma-G factor (Fragment) Bacillus thuringiensis subsp. kurstaki
P37970 1.51e-07 55 24 8 232 3 sigF RNA polymerase sigma-F factor Kitasatospora aureofaciens
Q9ZNX9 1.96e-07 55 27 10 255 1 SIGE RNA polymerase sigma factor sigE, chloroplastic/mitochondrial Arabidopsis thaliana
P17211 4.01e-06 50 25 11 252 3 whiG RNA polymerase sigma factor WhiG Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q9K5J6 1.76e-05 48 25 10 247 3 sigB RNA polymerase sigma-B factor Bacillus anthracis
P0AEM6 9.04e-05 46 26 8 206 1 fliA RNA polymerase sigma factor FliA Escherichia coli (strain K12)
P0AEM7 9.04e-05 46 26 8 206 3 fliA RNA polymerase sigma factor FliA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AEM8 9.04e-05 46 26 8 206 3 fliA RNA polymerase sigma factor FliA Escherichia coli O157:H7
P0A2E8 0.000105 46 26 8 205 1 fliA RNA polymerase sigma factor FliA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2E9 0.000105 46 26 8 205 3 fliA RNA polymerase sigma factor FliA Salmonella typhi
P17869 0.000236 45 31 2 106 1 sigH RNA polymerase sigma-H factor Bacillus subtilis (strain 168)
P02964 0.000595 43 32 1 94 3 sigH RNA polymerase sigma-H factor Bacillus licheniformis

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_06880
Feature type CDS
Gene rpoH
Product RNA polymerase sigma factor RpoH
Location 102310 - 103164 (strand: 1)
Length 855 (nucleotides) / 284 (amino acids)

Contig

Accession ZDB_363
Length 233386 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_764
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00140 Sigma-70 factor, region 1.2
PF04542 Sigma-70 region 2
PF04545 Sigma-70, region 4

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0568 Transcription (K) K DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03089 RNA polymerase sigma-32 factor - -

Protein Sequence

MTKDTQFPVLVPQGSIEAYIRAANQYPMLTAEEEKELAERLYYDGDLEAAKKLIMSHLRFVIHVARSYSGYGLPQADLIQEGNIGLMKAVRRFNPEMGVRLVSFAVHWIKAEIHEYVLRNWRIVKIATTKAQRKLFFNLRKSKKRLGWFNQDEVEMVAKELGVTSKDVLEMESRMAAQDMAFDMSDDDDGDHPVVAPALFLEDKSSDFADEIEEDNWDNHATDKLTLAIDSLDERSRDIIRARWLDDDSKTTLQELADKYGVSAERVRQLEKNAMKKLREAIEG

Flanking regions ( +/- flanking 50bp)

ATTCACCATTACCGTCTGCCGACGTCATTTTTATTTGTACTGAGGACTGAATGACTAAAGATACGCAATTCCCTGTTTTAGTTCCGCAAGGGAGCATTGAGGCCTATATCCGGGCAGCTAACCAGTATCCGATGCTGACAGCCGAAGAAGAAAAAGAGCTGGCTGAGCGTCTGTATTATGACGGCGACCTTGAGGCCGCGAAAAAACTGATCATGTCGCATCTGCGGTTTGTTATCCATGTCGCCCGCAGTTATTCAGGTTATGGCCTGCCTCAGGCGGATCTTATCCAGGAAGGCAATATCGGGCTGATGAAAGCGGTGCGCCGTTTTAACCCGGAAATGGGTGTGCGCCTGGTGTCGTTTGCGGTTCACTGGATCAAAGCTGAAATTCATGAGTATGTGCTGCGCAACTGGCGCATCGTTAAAATCGCCACCACCAAAGCACAGCGCAAACTGTTTTTTAATCTGCGCAAATCCAAAAAACGTCTGGGCTGGTTTAACCAGGACGAAGTGGAAATGGTGGCGAAAGAGCTGGGCGTAACCAGCAAAGATGTGCTGGAAATGGAATCCCGTATGGCGGCGCAGGACATGGCATTTGATATGTCCGACGACGACGACGGCGATCACCCGGTTGTGGCACCGGCACTGTTCCTGGAAGATAAATCCTCTGATTTCGCTGATGAAATTGAGGAAGATAACTGGGATAACCATGCCACGGACAAACTCACCCTGGCGATTGATTCACTGGATGAGCGCAGCCGCGACATTATCCGTGCCCGCTGGCTGGATGATGACAGCAAAACCACCCTCCAGGAACTGGCGGATAAATACGGCGTTTCTGCAGAGCGTGTCCGTCAGCTGGAAAAAAATGCCATGAAAAAACTGCGTGAGGCGATTGAGGGCTGATAACAATGCTCCCGTTTCCGCCGCAATCTGTTATGGTAGCCATAGTATTT