Orthogroup:group_764


Homologs in group_764

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_03515 FBDBKF_03515 Morganella morganii S1 rpoH RNA polymerase sigma factor RpoH
EHELCC_07020 EHELCC_07020 Morganella morganii S2 rpoH RNA polymerase sigma factor RpoH
NLDBIP_07345 NLDBIP_07345 Morganella morganii S4 rpoH RNA polymerase sigma factor RpoH
LHKJJB_06880 LHKJJB_06880 Morganella morganii S3 rpoH RNA polymerase sigma factor RpoH
HKOGLL_04050 HKOGLL_04050 Morganella morganii S5 rpoH RNA polymerase sigma factor RpoH
F4V73_RS11385 F4V73_RS11385 Morganella psychrotolerans rpoH RNA polymerase sigma factor RpoH
PMI_RS17955 PMI_RS17955 Proteus mirabilis HI4320 rpoH RNA polymerase sigma factor RpoH

Distribution of group_764 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_764 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_764

Orthogroup content: 7 members

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This page summarizes the annotation of all members of the orthologous group group_764.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 rpoH 7

Product

# Product Occurence
1 RNA polymerase sigma factor RpoH 7

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG0568 7 K Transcription (K) DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K03089 7 RNA polymerase sigma-32 factor - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00140 7 Sigma-70 factor, region 1.2
PF04542 7 Sigma-70 region 2
PF04545 7 Sigma-70, region 4

Annotations of the 160 SwissProt hits

Annotation Number of occurrences
Probable RNA polymerase sigma-C factor 1
Putative RNA polymerase sigma-G factor (Fragment) 1
RNA polymerase principal sigma factor HrdA 1
RNA polymerase principal sigma factor HrdB 2
RNA polymerase principal sigma factor HrdC 1
RNA polymerase principal sigma factor HrdD 3
RNA polymerase sigma factor FliA 6
RNA polymerase sigma factor RpoD 35
RNA polymerase sigma factor RpoD (Fragment) 1
RNA polymerase sigma factor RpoH 18
RNA polymerase sigma factor RpoS 11
RNA polymerase sigma factor SigA 36
RNA polymerase sigma factor SigA (Fragment) 1
RNA polymerase sigma factor SigA1 1
RNA polymerase sigma factor SigA2 1
RNA polymerase sigma factor SigA3 1
RNA polymerase sigma factor SigA4 1
RNA polymerase sigma factor SigB 3
RNA polymerase sigma factor SigF 2
RNA polymerase sigma factor WhiG 1
RNA polymerase sigma factor sigA 2
RNA polymerase sigma factor sigB 1
RNA polymerase sigma factor sigC 1
RNA polymerase sigma factor sigD, chloroplastic 1
RNA polymerase sigma factor sigE, chloroplastic/mitochondrial 1
RNA polymerase sigma factor sigF, chloroplastic 1
RNA polymerase sigma-28 factor 3
RNA polymerase sigma-35 factor 3
RNA polymerase sigma-B factor 5
RNA polymerase sigma-C factor 2
RNA polymerase sigma-D factor 1
RNA polymerase sigma-E factor 2
RNA polymerase sigma-F factor 5
RNA polymerase sigma-G factor 2
RNA polymerase sigma-H factor 2
RNA polymerase sigma-K factor 1

Protein length

Unique protein length 284

Protein length distribution