Homologs in group_1917

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14270 FBDBKF_14270 100.0 Morganella morganii S1 asd aspartate-semialdehyde dehydrogenase
EHELCC_08010 EHELCC_08010 100.0 Morganella morganii S2 asd aspartate-semialdehyde dehydrogenase
NLDBIP_08335 NLDBIP_08335 100.0 Morganella morganii S4 asd aspartate-semialdehyde dehydrogenase
HKOGLL_04985 HKOGLL_04985 100.0 Morganella morganii S5 asd aspartate-semialdehyde dehydrogenase
F4V73_RS02640 F4V73_RS02640 90.2 Morganella psychrotolerans - aspartate-semialdehyde dehydrogenase
PMI_RS08780 PMI_RS08780 65.8 Proteus mirabilis HI4320 - aspartate-semialdehyde dehydrogenase

Distribution of the homologs in the orthogroup group_1917

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1917

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P08390 1.11e-160 455 66 1 337 1 usg USG-1 protein Escherichia coli (strain K12)
P23247 1.67e-105 315 45 1 337 1 asd2 Aspartate-semialdehyde dehydrogenase 2 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q60080 8.82e-98 295 43 1 316 3 asd Aspartate-semialdehyde dehydrogenase (Fragment) Vibrio mimicus
Q56734 3.07e-97 294 41 2 338 3 asd Aspartate-semialdehyde dehydrogenase Shewanella violacea (strain JCM 10179 / CIP 106290 / LMG 19151 / DSS12)
Q56732 1.18e-96 292 41 2 338 3 asd Aspartate-semialdehyde dehydrogenase Shewanella sp. (strain DB6705)
O31219 1.32e-76 241 36 2 338 3 asd Aspartate-semialdehyde dehydrogenase Legionella pneumophila
O67716 1.64e-68 220 35 5 337 3 asd Aspartate-semialdehyde dehydrogenase Aquifex aeolicus (strain VF5)
P96199 1.19e-65 213 38 2 335 3 usg USG-1 protein homolog Azotobacter vinelandii
O87014 5.09e-61 201 38 3 336 1 usg USG-1 protein homolog Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q4UM57 3.97e-56 188 33 7 338 3 asd Aspartate-semialdehyde dehydrogenase Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q92IJ0 7.61e-56 187 32 5 335 3 asd Aspartate-semialdehyde dehydrogenase Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q9ZDL2 8.38e-56 187 31 3 337 3 asd Aspartate-semialdehyde dehydrogenase Rickettsia prowazekii (strain Madrid E)
Q68X56 1.21e-54 184 32 5 337 3 asd Aspartate-semialdehyde dehydrogenase Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q1RIB3 8.48e-54 182 31 5 339 3 asd Aspartate-semialdehyde dehydrogenase Rickettsia bellii (strain RML369-C)
P49420 1.58e-53 182 34 5 331 3 asd Aspartate-semialdehyde dehydrogenase Prochlorococcus marinus (strain SARG / CCMP1375 / SS120)
Q59291 5.55e-52 178 30 7 340 3 asd Aspartate-semialdehyde dehydrogenase Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
Q55512 3.97e-50 173 32 4 337 3 asd Aspartate-semialdehyde dehydrogenase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q04797 1.04e-49 172 31 5 344 1 asd Aspartate-semialdehyde dehydrogenase Bacillus subtilis (strain 168)
P10539 1.87e-48 169 31 8 346 3 asd Aspartate-semialdehyde dehydrogenase Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
Q53612 2.26e-48 168 33 7 342 3 asd Aspartate-semialdehyde dehydrogenase Streptomyces akiyoshiensis
P41404 1.43e-43 156 31 6 347 3 asd Aspartate-semialdehyde dehydrogenase Mycolicibacterium smegmatis
P9WNX5 2.09e-42 153 31 5 347 1 asd Aspartate-semialdehyde dehydrogenase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WNX4 2.09e-42 153 31 5 347 3 asd Aspartate-semialdehyde dehydrogenase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P0A543 2.09e-42 153 31 5 347 3 asd Aspartate-semialdehyde dehydrogenase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q9ZK28 1.04e-36 138 28 8 342 3 asd Aspartate-semialdehyde dehydrogenase Helicobacter pylori (strain J99 / ATCC 700824)
O25801 8.49e-36 135 27 8 342 3 asd Aspartate-semialdehyde dehydrogenase Helicobacter pylori (strain ATCC 700392 / 26695)
P0C1D9 1.64e-35 134 29 8 347 3 asd Aspartate-semialdehyde dehydrogenase Corynebacterium melassecola
P41400 2.72e-35 134 29 8 347 3 asd Aspartate-semialdehyde dehydrogenase Corynebacterium flavescens
P0C1D8 4.63e-35 133 29 8 347 3 asd Aspartate-semialdehyde dehydrogenase Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
P45201 1.16e-28 115 29 7 295 3 usg USG-1 protein homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O26890 1.12e-13 74 24 11 365 3 asd Aspartate-semialdehyde dehydrogenase Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
O28766 1.13e-10 65 22 13 367 3 asd Aspartate-semialdehyde dehydrogenase Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q57658 2.79e-10 64 24 15 348 1 asd Aspartate-semialdehyde dehydrogenase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P41394 2.48e-08 58 23 7 272 3 asd Aspartate-semialdehyde dehydrogenase Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601)
Q75FC8 2.69e-08 58 23 7 272 3 asd Aspartate-semialdehyde dehydrogenase Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130)
P13663 1.47e-06 53 28 7 192 1 HOM2 Aspartate-semialdehyde dehydrogenase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P78780 6.56e-06 50 23 11 277 1 SPCC1827.06c Probable aspartate-semialdehyde dehydrogenase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q96YK1 0.000747 44 30 5 139 1 mcr Malonyl-CoA reductase Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_05930
Feature type CDS
Gene asd
Product aspartate-semialdehyde dehydrogenase
Location 193406 - 194416 (strand: -1)
Length 1011 (nucleotides) / 336 (amino acids)

Contig

Accession ZDB_362
Length 257361 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1917
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01118 Semialdehyde dehydrogenase, NAD binding domain
PF02774 Semialdehyde dehydrogenase, dimerisation domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0136 Amino acid transport and metabolism (E) E Aspartate-semialdehyde dehydrogenase

Kegg Ortholog Annotation(s)

Protein Sequence

MSEGWNIAVLGATGAVGSAVVSLLEEREFPVGELYLLAGERSAGESVRMNGKSYLVTEARDFDWSQVQLAFFMAGAEATAAYYEAATDSGCIVIDSSGLFALEPDVPLVVPSVNPQALSEYRNRNLIALADSTVSQLLTAIRPLVESAGLSRINLTNLFSVSRFGKSAVEELAGECAKLLNGIPPEAGRFSKQLAFNLLPLLTDEQGSVSEERRIAEETRKVLQDAGLPISVSCVQSPVFYGNAQIVQLETLRPLGSEEARDELERAEDIQLSEEQEFPTQVTDASGNHLLNIGCLRNDYGIPEILHFWSVADNVQFGGALMAVEIAERLTQEQFY

Flanking regions ( +/- flanking 50bp)

TTCTGACTGTACCGCGCTGACGCGGTGCAGTCTTTGTTCCGGAGATAACTATGTCAGAAGGCTGGAATATTGCCGTATTGGGTGCGACCGGTGCTGTCGGCAGCGCCGTGGTGTCATTACTGGAAGAGCGTGAATTTCCGGTGGGAGAGCTATATTTACTGGCCGGGGAGCGCAGCGCGGGAGAATCGGTGCGCATGAACGGCAAAAGCTATCTGGTTACCGAAGCCCGTGATTTTGACTGGTCACAGGTGCAGCTGGCCTTTTTCATGGCCGGTGCGGAAGCCACCGCCGCGTATTATGAAGCGGCGACAGACAGCGGCTGTATTGTGATTGACAGCAGCGGTCTGTTTGCGCTGGAGCCTGATGTGCCGCTGGTGGTGCCGTCGGTGAACCCGCAGGCACTGAGCGAATACCGCAACCGTAACCTGATTGCGCTGGCAGACAGCACCGTCAGCCAGTTACTGACCGCTATCCGTCCGCTGGTGGAGAGTGCCGGGTTATCCCGTATCAATCTGACCAACCTGTTCTCTGTTTCCCGTTTCGGGAAAAGTGCGGTGGAAGAGCTGGCCGGGGAGTGTGCAAAACTCCTCAACGGCATCCCGCCGGAAGCCGGTCGTTTCAGTAAACAGCTGGCGTTTAACCTTCTGCCATTGCTGACCGATGAGCAGGGCAGTGTGTCAGAAGAGCGCCGTATCGCGGAAGAAACCCGCAAAGTCCTGCAGGATGCCGGCCTGCCGATCAGCGTGAGCTGTGTGCAGTCCCCGGTGTTCTACGGCAACGCGCAGATAGTGCAGCTGGAAACACTGCGCCCGCTCGGCAGTGAAGAGGCCCGTGATGAACTGGAACGGGCAGAGGATATTCAGCTCTCGGAAGAGCAGGAATTCCCGACTCAGGTGACGGATGCCTCCGGCAATCATCTGCTGAATATCGGTTGTCTGCGTAATGATTACGGTATTCCGGAAATTCTGCATTTCTGGTCAGTGGCGGATAACGTACAGTTTGGCGGCGCACTGATGGCAGTCGAAATTGCCGAGCGTCTGACGCAGGAGCAGTTTTACTGATGTCAGAGGTGATTTTACCGGCGGAAGAGGGTAAAACCACGATCGCGCTG