Homologs in group_1896

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14150 FBDBKF_14150 100.0 Morganella morganii S1 nuoE NADH-quinone oxidoreductase subunit NuoE
EHELCC_08130 EHELCC_08130 100.0 Morganella morganii S2 nuoE NADH-quinone oxidoreductase subunit NuoE
NLDBIP_08455 NLDBIP_08455 100.0 Morganella morganii S4 nuoE NADH-quinone oxidoreductase subunit NuoE
HKOGLL_05105 HKOGLL_05105 100.0 Morganella morganii S5 nuoE NADH-quinone oxidoreductase subunit NuoE
F4V73_RS02785 F4V73_RS02785 96.2 Morganella psychrotolerans nuoE NADH-quinone oxidoreductase subunit NuoE
PMI_RS08630 PMI_RS08630 80.6 Proteus mirabilis HI4320 nuoE NADH-quinone oxidoreductase subunit NuoE

Distribution of the homologs in the orthogroup group_1896

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1896

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A1Y8 7.31e-98 283 86 0 154 3 nuoE NADH-quinone oxidoreductase subunit E Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1Y9 7.31e-98 283 86 0 154 3 nuoE NADH-quinone oxidoreductase subunit E Salmonella typhi
P0AFD3 8.61e-96 278 84 0 154 3 nuoE NADH-quinone oxidoreductase subunit E Shigella flexneri
P0AFD1 8.61e-96 278 84 0 154 1 nuoE NADH-quinone oxidoreductase subunit E Escherichia coli (strain K12)
P0AFD2 8.61e-96 278 84 0 154 3 nuoE NADH-quinone oxidoreductase subunit E Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q9I0J8 2.58e-79 236 70 0 154 3 nuoE NADH-quinone oxidoreductase subunit E Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P57255 2.33e-75 226 67 0 154 3 nuoE NADH-quinone oxidoreductase subunit E Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8K9Y4 9.95e-71 214 63 0 154 3 nuoE NADH-quinone oxidoreductase subunit E Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89AU3 9.02e-57 179 48 0 154 3 nuoE NADH-quinone oxidoreductase subunit E Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
O66842 2.47e-28 106 30 0 155 1 nuoE NADH-quinone oxidoreductase subunit E Aquifex aeolicus (strain VF5)
P56910 3.23e-28 106 36 0 147 3 nuoE2 NADH-quinone oxidoreductase subunit E 2 Rhizobium meliloti (strain 1021)
P19234 2.45e-25 100 33 0 154 1 Ndufv2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Rattus norvegicus
Q20719 4.75e-25 100 31 1 154 3 F53F4.10 Probable NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Caenorhabditis elegans
Q9D6J6 1.61e-24 99 32 2 161 1 Ndufv2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Mus musculus
P04394 2.57e-24 98 30 0 154 1 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Bos taurus
Q0MQI7 2.95e-23 95 31 2 161 2 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Pongo pygmaeus
Q0MQI8 2.95e-23 95 31 2 161 2 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Gorilla gorilla gorilla
Q0MQI9 3.56e-23 95 31 2 161 2 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Pan troglodytes
P19404 3.64e-23 95 31 2 161 1 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Homo sapiens
Q9ZDH5 2.31e-21 89 31 1 147 3 nuoE NADH-quinone oxidoreductase subunit E Rickettsia prowazekii (strain Madrid E)
O52681 3.39e-21 88 29 1 147 1 hydC Bifurcating [FeFe] hydrogenase gamma subunit Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Q68X20 4.84e-21 87 30 2 163 3 nuoE NADH-quinone oxidoreductase subunit E Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q1RJJ1 7.44e-20 84 30 1 146 3 nuoE NADH-quinone oxidoreductase subunit E Rickettsia bellii (strain RML369-C)
Q4UM09 1.5e-19 84 32 1 134 3 nuoE NADH-quinone oxidoreductase subunit E Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
P56909 8.28e-19 84 31 3 170 3 nuoE1 NADH-quinone oxidoreductase subunit E 1 Rhizobium meliloti (strain 1021)
Q56221 1.28e-18 82 32 1 138 1 nqo2 NADH-quinone oxidoreductase subunit 2 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
P22317 5.68e-18 84 31 0 138 1 hoxF NAD-reducing hydrogenase HoxS subunit alpha Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P29914 1.44e-17 80 30 2 161 1 nqo2 NADH-quinone oxidoreductase chain 2 Paracoccus denitrificans
P9WIV5 2.97e-17 79 28 3 179 1 nuoE NADH-quinone oxidoreductase subunit E Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WIV4 2.97e-17 79 28 3 179 3 nuoE NADH-quinone oxidoreductase subunit E Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P65574 2.97e-17 79 28 3 179 3 nuoE NADH-quinone oxidoreductase subunit E Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q54F10 3.45e-17 79 28 1 155 3 ndufv2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Dictyostelium discoideum
P40915 5.66e-17 79 28 1 153 2 nuo-24 NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
Q92ID9 4.96e-16 74 28 1 133 3 nuoE NADH-quinone oxidoreductase subunit E Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q46505 1.55e-15 73 31 0 108 1 hndA NADP-reducing hydrogenase subunit HndA Solidesulfovibrio fructosivorans
O22769 2.86e-13 68 29 2 143 1 At4g02580 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Arabidopsis thaliana
O13691 5.54e-06 47 23 2 131 3 SPAC11E3.12 NADH-ubiquinone oxidoreductase 24 kDa subunit homolog C11E3.12, mitochondrial Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q9X1D7 0.000392 40 30 3 80 1 TM_1420 Protein TM_1420 Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_05810
Feature type CDS
Gene nuoE
Product NADH-quinone oxidoreductase subunit NuoE
Location 166243 - 166791 (strand: -1)
Length 549 (nucleotides) / 182 (amino acids)

Contig

Accession ZDB_362
Length 257361 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1896
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01257 Thioredoxin-like [2Fe-2S] ferredoxin

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1905 Energy production and conversion (C) C NADH:ubiquinone oxidoreductase 24 kD subunit (chain E)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K00334 NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] Oxidative phosphorylation
Metabolic pathways		 NADH:quinone oxidoreductase, prokaryotes

Protein Sequence

MQELNPEAKKALQGAVNAAQPAGKQPDFVLSDEERAEIEAEKHHYEDPRAASIEALKIVQKHRGWVEDGAIYAISDVLGIPASDVEGVATFYSQIYRQPVGRHVIRYCDSVVCHITGYQGIKAALERKLNIQPGQTTADGRFTLLPTCCLGNCDKGPTMMVDEDTHSHVTPEAIETLLEQYP

Flanking regions ( +/- flanking 50bp)

GTGTACCTCGGAAGTATCGATTTCGTTATGTCGGATGTGGATCGCTGATTATGCAAGAACTGAACCCTGAAGCAAAAAAAGCACTGCAAGGCGCAGTGAATGCGGCGCAGCCAGCCGGAAAACAACCTGATTTTGTGCTGAGTGACGAAGAGCGCGCCGAAATCGAAGCGGAAAAACACCATTACGAAGATCCGCGTGCCGCCTCTATCGAAGCGCTGAAAATTGTGCAGAAGCACCGTGGCTGGGTGGAAGACGGCGCGATTTACGCCATCAGCGATGTGCTGGGCATCCCGGCGAGTGATGTGGAAGGTGTGGCGACATTCTACAGCCAGATCTACCGTCAGCCGGTCGGCCGTCATGTGATCCGTTACTGTGACAGCGTGGTGTGCCACATCACCGGTTACCAGGGGATCAAGGCCGCACTCGAGCGCAAACTGAATATTCAGCCGGGACAGACAACCGCTGACGGCCGCTTTACGCTGTTGCCGACCTGCTGCCTCGGAAACTGTGACAAGGGGCCGACCATGATGGTTGATGAAGATACCCACAGTCACGTTACGCCTGAAGCCATTGAAACGTTACTGGAGCAGTATCCATGACAGTGAAAACGGTTTGCCGTACTGCGGAAACGCATCCTCTCACCTGGCGG