COG1905


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1905, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description NADH:ubiquinone oxidoreductase 24 kD subunit (chain E)
Function(s) descr. Energy production and conversion (C)

Occurence in the database

COG1905 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_1896 FBDBKF_14150 26069 26617 -1 nuoE NADH-quinone oxidoreductase subunit NuoE Morganella morganii S1
1 group_1896 EHELCC_08130 90368 90916 1 nuoE NADH-quinone oxidoreductase subunit NuoE Morganella morganii S2
2 group_1896 NLDBIP_08455 90368 90916 1 nuoE NADH-quinone oxidoreductase subunit NuoE Morganella morganii S4
3 group_1896 LHKJJB_05810 166243 166791 -1 nuoE NADH-quinone oxidoreductase subunit NuoE Morganella morganii S3
4 group_1896 HKOGLL_05105 74959 75507 1 nuoE NADH-quinone oxidoreductase subunit NuoE Morganella morganii S5
5 group_1896 F4V73_RS02785 587748 588296 1 nuoE NADH-quinone oxidoreductase subunit NuoE Morganella psychrotolerans
6 group_1896 PMI_RS08630 1885076 1885621 -1 nuoE NADH-quinone oxidoreductase subunit NuoE Proteus mirabilis HI4320