Homologs in group_1896

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14150 FBDBKF_14150 96.2 Morganella morganii S1 nuoE NADH-quinone oxidoreductase subunit NuoE
EHELCC_08130 EHELCC_08130 96.2 Morganella morganii S2 nuoE NADH-quinone oxidoreductase subunit NuoE
NLDBIP_08455 NLDBIP_08455 96.2 Morganella morganii S4 nuoE NADH-quinone oxidoreductase subunit NuoE
LHKJJB_05810 LHKJJB_05810 96.2 Morganella morganii S3 nuoE NADH-quinone oxidoreductase subunit NuoE
HKOGLL_05105 HKOGLL_05105 96.2 Morganella morganii S5 nuoE NADH-quinone oxidoreductase subunit NuoE
PMI_RS08630 PMI_RS08630 78.9 Proteus mirabilis HI4320 nuoE NADH-quinone oxidoreductase subunit NuoE

Distribution of the homologs in the orthogroup group_1896

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1896

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A1Y8 1.43e-98 285 86 0 154 3 nuoE NADH-quinone oxidoreductase subunit E Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1Y9 1.43e-98 285 86 0 154 3 nuoE NADH-quinone oxidoreductase subunit E Salmonella typhi
P0AFD3 1.72e-96 279 84 0 154 3 nuoE NADH-quinone oxidoreductase subunit E Shigella flexneri
P0AFD1 1.72e-96 279 84 0 154 1 nuoE NADH-quinone oxidoreductase subunit E Escherichia coli (strain K12)
P0AFD2 1.72e-96 279 84 0 154 3 nuoE NADH-quinone oxidoreductase subunit E Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q9I0J8 8.16e-80 237 70 0 154 3 nuoE NADH-quinone oxidoreductase subunit E Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P57255 1.09e-74 224 66 0 154 3 nuoE NADH-quinone oxidoreductase subunit E Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8K9Y4 7.21e-70 212 62 0 154 3 nuoE NADH-quinone oxidoreductase subunit E Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89AU3 4.44e-57 180 50 0 154 3 nuoE NADH-quinone oxidoreductase subunit E Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
O66842 1.15e-28 107 30 0 155 1 nuoE NADH-quinone oxidoreductase subunit E Aquifex aeolicus (strain VF5)
P56910 1.27e-27 104 36 0 147 3 nuoE2 NADH-quinone oxidoreductase subunit E 2 Rhizobium meliloti (strain 1021)
P19234 7.78e-25 99 32 0 154 1 Ndufv2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Rattus norvegicus
Q20719 4.04e-24 97 33 0 130 3 F53F4.10 Probable NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Caenorhabditis elegans
Q9D6J6 6.66e-24 97 31 0 154 1 Ndufv2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Mus musculus
P04394 9.03e-24 97 29 0 154 1 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Bos taurus
Q0MQI7 1.03e-22 94 29 0 154 2 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Pongo pygmaeus
Q0MQI8 1.03e-22 94 29 0 154 2 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Gorilla gorilla gorilla
P19404 1.2e-22 94 29 0 154 1 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Homo sapiens
Q0MQI9 1.22e-22 94 29 0 154 2 NDUFV2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Pan troglodytes
O52681 2.14e-21 88 30 1 147 1 hydC Bifurcating [FeFe] hydrogenase gamma subunit Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Q9ZDH5 1.34e-20 87 32 1 137 3 nuoE NADH-quinone oxidoreductase subunit E Rickettsia prowazekii (strain Madrid E)
Q68X20 1.58e-20 86 33 1 134 3 nuoE NADH-quinone oxidoreductase subunit E Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q1RJJ1 1.98e-19 83 29 1 141 3 nuoE NADH-quinone oxidoreductase subunit E Rickettsia bellii (strain RML369-C)
Q4UM09 3e-19 83 32 1 134 3 nuoE NADH-quinone oxidoreductase subunit E Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
P22317 2.63e-18 85 31 0 138 1 hoxF NAD-reducing hydrogenase HoxS subunit alpha Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
Q56221 4.48e-18 80 31 1 138 1 nqo2 NADH-quinone oxidoreductase subunit 2 Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
P56909 2.84e-17 80 29 3 170 3 nuoE1 NADH-quinone oxidoreductase subunit E 1 Rhizobium meliloti (strain 1021)
P9WIV5 4.68e-17 79 28 3 178 1 nuoE NADH-quinone oxidoreductase subunit E Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WIV4 4.68e-17 79 28 3 178 3 nuoE NADH-quinone oxidoreductase subunit E Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P65574 4.68e-17 79 28 3 178 3 nuoE NADH-quinone oxidoreductase subunit E Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P40915 1.41e-16 78 30 1 132 2 nuo-24 NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
Q54F10 1.92e-16 77 28 1 155 3 ndufv2 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Dictyostelium discoideum
P29914 7.55e-16 75 29 2 161 1 nqo2 NADH-quinone oxidoreductase chain 2 Paracoccus denitrificans
Q92ID9 9.05e-16 73 28 1 133 3 nuoE NADH-quinone oxidoreductase subunit E Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q46505 2.76e-15 72 30 0 108 1 hndA NADP-reducing hydrogenase subunit HndA Solidesulfovibrio fructosivorans
O22769 2.61e-13 69 26 4 171 1 At4g02580 NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial Arabidopsis thaliana
O13691 4.49e-07 50 24 2 131 3 SPAC11E3.12 NADH-ubiquinone oxidoreductase 24 kDa subunit homolog C11E3.12, mitochondrial Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q9X1D7 0.000373 40 30 3 80 1 TM_1420 Protein TM_1420 Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS02785
Feature type CDS
Gene nuoE
Product NADH-quinone oxidoreductase subunit NuoE
Location 587748 - 588296 (strand: 1)
Length 549 (nucleotides) / 182 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1896
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01257 Thioredoxin-like [2Fe-2S] ferredoxin

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1905 Energy production and conversion (C) C NADH:ubiquinone oxidoreductase 24 kD subunit (chain E)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K00334 NADH-quinone oxidoreductase subunit E [EC:7.1.1.2] Oxidative phosphorylation
Metabolic pathways		 NADH:quinone oxidoreductase, prokaryotes

Protein Sequence

MQELNPEAKKTLQGAVNAAQPAGKQPDFVLSEKERTEIEAEKHHYEDPRAASIEALKIVQKHRGWVEDGAIYAISDVLGIPASDIEGVATFYSQIFRQPVGRHVIRYCDSVVCHITGYQGIKAALERKLNIQPGQTTTDGRFTLLPTCCLGNCDKGPTMMVDEDTHSHVTPEAIETLLEQYP

Flanking regions ( +/- flanking 50bp)

GTGTACCTCGGGAGTATCGATTTCGTAATGTCGGATGTGGATCGCTGATTATGCAAGAACTGAACCCTGAAGCAAAAAAAACACTGCAAGGTGCCGTGAATGCGGCACAACCTGCCGGAAAACAACCTGATTTTGTGCTCAGTGAAAAAGAGCGCACAGAAATTGAAGCGGAAAAGCATCACTACGAGGATCCGCGCGCAGCCTCTATCGAAGCCCTGAAAATAGTGCAGAAGCACAGAGGCTGGGTGGAAGACGGCGCTATTTACGCCATCAGTGATGTTCTCGGTATTCCGGCGAGTGATATTGAAGGTGTGGCGACATTCTACAGCCAGATTTTCCGCCAGCCGGTCGGGCGCCATGTGATCCGTTACTGTGACAGCGTGGTGTGCCACATCACCGGTTATCAGGGGATCAAGGCCGCCCTGGAGCGCAAATTAAATATTCAGCCGGGACAGACAACCACGGACGGCCGCTTCACATTGCTGCCGACCTGTTGCCTGGGGAACTGTGACAAGGGGCCGACCATGATGGTTGATGAAGATACCCACAGTCACGTCACCCCGGAGGCTATTGAAACGTTACTGGAGCAGTATCCATGACAGTGAAAACGGTTTGCCGTACGGCGGAAACGCACCCGCTTACCTGGCGG