Homologs in group_931

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05055 FBDBKF_05055 100.0 Morganella morganii S1 nth endonuclease III
EHELCC_12535 EHELCC_12535 100.0 Morganella morganii S2 nth endonuclease III
NLDBIP_12875 NLDBIP_12875 100.0 Morganella morganii S4 nth endonuclease III
LHKJJB_12735 LHKJJB_12735 100.0 Morganella morganii S3 nth endonuclease III
F4V73_RS05495 F4V73_RS05495 95.3 Morganella psychrotolerans nth endonuclease III
PMI_RS06320 PMI_RS06320 86.8 Proteus mirabilis HI4320 nth endonuclease III

Distribution of the homologs in the orthogroup group_931

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_931

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AB83 5.68e-136 382 85 0 209 1 nth Endonuclease III Escherichia coli (strain K12)
P0AB84 5.68e-136 382 85 0 209 3 nth Endonuclease III Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P44319 3.25e-125 355 80 0 209 3 nth Endonuclease III Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57219 2.43e-91 269 59 0 210 3 nth Endonuclease III Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8KA16 4.7e-87 258 56 0 208 3 nth Endonuclease III Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89AW4 9.14e-77 233 50 0 208 3 nth Endonuclease III Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q92GH4 8.23e-75 227 53 1 201 3 nth Endonuclease III Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q4UK93 1.17e-72 222 52 0 198 3 nth Endonuclease III Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
O05956 2.33e-70 216 50 0 198 3 nth Endonuclease III Rickettsia prowazekii (strain Madrid E)
Q68W04 3.31e-70 216 49 0 198 3 nth Endonuclease III Rickettsia typhi (strain ATCC VR-144 / Wilmington)
O83754 3.13e-69 213 54 0 195 3 nth Endonuclease III Treponema pallidum (strain Nichols)
P39788 8.72e-52 169 44 2 206 3 nth Endonuclease III Bacillus subtilis (strain 168)
P46303 2.29e-38 136 41 2 195 1 pdg Ultraviolet N-glycosylase/AP lyase Micrococcus luteus (strain ATCC 4698 / DSM 20030 / JCM 1464 / CCM 169 / CCUG 5858 / IAM 1056 / NBRC 3333 / NCIMB 9278 / NCTC 2665 / VKM Ac-2230)
P73715 2.76e-37 132 36 1 203 3 nth Endonuclease III Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q9WYK0 1.61e-36 130 35 0 177 3 nth Endonuclease III Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
Q9CB92 3.28e-36 130 35 1 209 3 nth Endonuclease III Mycobacterium leprae (strain TN)
P9WQ11 5.67e-35 127 38 0 186 1 nth Endonuclease III Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WQ10 5.67e-35 127 38 0 186 3 nth Endonuclease III Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P63541 5.67e-35 127 38 0 186 3 nth Endonuclease III Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q58030 6.91e-22 94 31 2 205 3 nth Endonuclease III Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q2KID2 8.79e-22 94 30 2 177 2 NTHL1 Endonuclease III-like protein 1 Bos taurus
P54137 4.34e-21 92 30 2 178 1 nth-1 Endonuclease III homolog Caenorhabditis elegans
P78549 8.94e-21 91 29 3 196 1 NTHL1 Endonuclease III-like protein 1 Homo sapiens
O35980 4.23e-20 89 29 2 181 2 Nthl1 Endonuclease III-like protein 1 Mus musculus
A7M7B9 1.12e-18 85 25 4 221 2 NTHL1 Endonuclease III-like protein 1 Gallus gallus
B9DFZ0 1.61e-18 85 30 4 191 2 NTH2 Endonuclease III homolog 2, chloroplastic Arabidopsis thaliana
Q9SIC4 9.7e-18 83 30 4 183 2 NTH1 Endonuclease III homolog 1, chloroplastic Arabidopsis thaliana
P29588 1.51e-17 80 29 1 184 1 mig Thymine/uracil-DNA glycosylase Methanothermobacter thermautotrophicus
Q8SRB8 1.31e-16 78 27 3 201 1 NTH1 Endonuclease III homolog Encephalitozoon cuniculi (strain GB-M1)
Q7LX22 2.57e-14 72 28 4 188 1 PAE3199 Thymine/uracil-DNA glycosylase Pyrobaculum aerophilum (strain ATCC 51768 / DSM 7523 / JCM 9630 / CIP 104966 / NBRC 100827 / IM2)
Q09907 4.33e-14 73 26 4 187 1 nth1 Endonuclease III homolog Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q08214 3.37e-13 70 25 4 187 1 NTG2 Endonuclease III homolog 2 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q9YDP0 1.23e-12 67 24 3 184 1 APE_0875.1 Thymine-DNA glycosylase Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1)
C8VC05 1.43e-11 66 28 1 135 3 nth1 Endonuclease III homolog Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Q05869 3.87e-11 64 27 4 183 3 mutY Adenine DNA glycosylase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P17802 3.69e-10 62 27 4 183 1 mutY Adenine DNA glycosylase Escherichia coli (strain K12)
Q89A45 1.76e-08 57 25 7 185 3 mutY Adenine DNA glycosylase Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P31378 2.05e-08 57 25 4 177 1 NTG1 Endonuclease III homolog 1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q10159 5.2e-08 55 30 3 130 1 myh1 Adenine DNA glycosylase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P83847 8.01e-08 55 24 3 190 1 mutY Adenine DNA glycosylase Geobacillus stearothermophilus
P9WQ09 1.36e-07 54 27 5 193 1 mutY Adenine DNA glycosylase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WQ08 1.36e-07 54 27 5 193 3 mutY Adenine DNA glycosylase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P57617 2.76e-07 53 22 6 189 3 mutY Adenine DNA glycosylase Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q9UIF7 4.78e-07 53 25 4 160 1 MUTYH Adenine DNA glycosylase Homo sapiens
P44320 3.78e-06 50 26 3 146 3 mutY Adenine DNA glycosylase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q8R5G2 1.64e-05 48 24 4 160 2 Mutyh Adenine DNA glycosylase Rattus norvegicus
F4JCQ3 0.000171 45 26 5 169 3 At3g47830 Putative DNA glycosylase At3g47830 Arabidopsis thaliana
Q99P21 0.000207 45 24 5 157 1 Mutyh Adenine DNA glycosylase Mus musculus
O31584 0.000283 44 23 2 149 2 mutY Adenine DNA glycosylase Bacillus subtilis (strain 168)
Q8K926 0.000307 44 23 3 133 3 mutY Adenine DNA glycosylase Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_11350
Feature type CDS
Gene nth
Product endonuclease III
Location 163859 - 164500 (strand: -1)
Length 642 (nucleotides) / 213 (amino acids)

Contig

Accession ZDB_688
Length 181491 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_931
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00633 Helix-hairpin-helix motif
PF00730 HhH-GPD superfamily base excision DNA repair protein
PF10576 Iron-sulfur binding domain of endonuclease III

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0177 Replication, recombination and repair (L) L Endonuclease III

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K10773 endonuclease III [EC:3.2.2.- 4.2.99.18] Base excision repair -

Protein Sequence

MNKEKRIEILTRLRDNNPQPTTELLFDSPFELLISVLLSAQATDVSVNKATRPLYAVANTPQAILDLGVDGVKSYIKTIGLFNTKAENVIKTCRMLVDLHNGEVPEDRAALEALPGVGRKTANVVLNTAFGWPTIAVDTHIFRVCNRTKFAPGKNVDEVEQKLLRVVPAEFKVDCHHWFILHGRYTCVARKPRCGSCIIEDLCEFSEKVYPED

Flanking regions ( +/- flanking 50bp)

CAGGCTCCTCTCCGGGAGGCTGCTTTTATCATGAATGAGCCAATGTCGTTATGAATAAAGAAAAACGTATTGAAATCCTGACCCGCCTGCGGGACAACAACCCGCAACCCACCACTGAACTGCTGTTTGATTCTCCGTTTGAATTACTGATCTCCGTCTTATTATCCGCCCAGGCGACAGATGTCAGTGTCAATAAAGCCACCCGTCCGCTGTATGCCGTTGCCAATACGCCGCAGGCCATTCTGGATCTGGGTGTGGACGGTGTGAAATCCTATATTAAAACCATCGGGTTATTTAATACCAAAGCAGAAAATGTGATTAAAACCTGCCGGATGCTGGTTGATCTGCACAACGGTGAGGTACCGGAAGACAGAGCTGCTCTTGAGGCGCTGCCGGGTGTGGGGCGCAAAACTGCCAATGTGGTGCTCAATACTGCGTTCGGCTGGCCGACCATTGCTGTTGATACCCATATTTTCCGTGTCTGTAACCGCACAAAATTTGCCCCCGGTAAAAATGTGGATGAGGTGGAACAAAAATTATTGCGGGTTGTTCCGGCAGAATTTAAAGTCGACTGCCACCATTGGTTTATACTGCACGGGCGTTACACCTGTGTTGCCCGCAAACCCCGCTGCGGTTCATGCATCATTGAGGATTTGTGTGAATTCAGCGAAAAAGTGTATCCGGAAGATTAATCTGCTGCGCTTTAAACAGAAATTGCCCTCTGTGCTTGCGGGCAGCGTAA