COG0177


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0177, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Endonuclease III
Function(s) descr. Replication, recombination and repair (L)

Occurence in the database

COG0177 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_931 FBDBKF_05055 16994 17635 1 nth endonuclease III Morganella morganii S1
1 group_931 EHELCC_12535 163859 164500 -1 nth endonuclease III Morganella morganii S2
2 group_931 NLDBIP_12875 163814 164455 -1 nth endonuclease III Morganella morganii S4
3 group_931 LHKJJB_12735 163859 164500 -1 nth endonuclease III Morganella morganii S3
4 group_931 HKOGLL_11350 163859 164500 -1 nth endonuclease III Morganella morganii S5
5 group_931 F4V73_RS05495 1168377 1169018 1 nth endonuclease III Morganella psychrotolerans
6 group_931 PMI_RS06320 1385154 1385792 1 nth endonuclease III Proteus mirabilis HI4320