Homologs in group_1208

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07015 FBDBKF_07015 100.0 Morganella morganii S1 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain
EHELCC_03955 EHELCC_03955 100.0 Morganella morganii S2 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain
NLDBIP_03955 NLDBIP_03955 100.0 Morganella morganii S4 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain
LHKJJB_09785 LHKJJB_09785 100.0 Morganella morganii S3 hisJ ABC-type amino acid transport/signal transduction system, periplasmic component/domain
F4V73_RS01205 F4V73_RS01205 97.1 Morganella psychrotolerans artJ arginine ABC transporter substrate-binding protein
PMI_RS03350 PMI_RS03350 74.2 Proteus mirabilis HI4320 artJ arginine ABC transporter substrate-binding protein

Distribution of the homologs in the orthogroup group_1208

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1208

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P30859 1.71e-122 351 65 1 244 1 artI Putative ABC transporter arginine-binding protein 2 Escherichia coli (strain K12)
P30860 6.7e-109 316 59 1 243 1 artJ ABC transporter arginine-binding protein 1 Escherichia coli (strain K12)
P45091 2.59e-76 233 47 3 242 1 artI ABC transporter arginine-binding protein Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P49618 1.88e-69 216 46 4 243 3 lapT Arginine-binding periplasmic protein Mannheimia haemolytica
P0AEU0 4.84e-55 180 40 4 229 1 hisJ Histidine-binding periplasmic protein Escherichia coli (strain K12)
P0AEU1 4.84e-55 180 40 4 229 3 hisJ Histidine-binding periplasmic protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AEU2 4.84e-55 180 40 4 229 3 hisJ Histidine-binding periplasmic protein Escherichia coli O157:H7
P02910 6.07e-55 180 41 4 229 1 hisJ Histidine-binding periplasmic protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P09551 2.68e-52 173 37 6 254 1 argT Lysine/arginine/ornithine-binding periplasmic protein Escherichia coli (strain K12)
G3XD47 1.36e-50 169 38 3 231 1 aotJ L-arginine-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P02911 2.29e-49 165 36 6 254 1 argT Lysine/arginine/ornithine-binding periplasmic protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P35120 1.47e-42 149 30 5 268 1 nocT Nopaline-binding periplasmic protein Agrobacterium fabrum (strain C58 / ATCC 33970)
P0AEQ3 4.83e-39 138 35 5 245 1 glnH Glutamine-binding periplasmic protein Escherichia coli (strain K12)
P0AEQ4 4.83e-39 138 35 5 245 3 glnH Glutamine-binding periplasmic protein Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AEQ5 4.83e-39 138 35 5 245 3 glnH Glutamine-binding periplasmic protein Escherichia coli O157:H7
P54535 2.1e-36 132 37 9 257 1 artP Arginine-binding extracellular protein ArtP Bacillus subtilis (strain 168)
P0A4F8 8.62e-35 128 31 7 272 1 occT Octopine-binding periplasmic protein Rhizobium radiobacter
P0A4F9 8.62e-35 128 31 7 272 3 occT Octopine-binding periplasmic protein Agrobacterium tumefaciens (strain Ach5)
Q06758 1.22e-31 120 33 5 233 3 hisJ Probable histidine-binding protein Neisseria gonorrhoeae
P0AEM9 1.09e-30 117 30 4 228 1 tcyJ L-cystine-binding protein TcyJ Escherichia coli (strain K12)
P0AEN0 1.09e-30 117 30 4 228 3 tcyJ L-cystine-binding protein TcyJ Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P72298 1.51e-30 117 28 8 289 3 occT Octopine-binding periplasmic protein Rhizobium meliloti
O34563 3.82e-29 113 31 5 234 2 glnH ABC transporter glutamine-binding protein GlnH Bacillus subtilis (strain 168)
Q9Z869 4.07e-28 110 30 4 219 1 artJ Probable ABC transporter arginine-binding protein ArtJ Chlamydia pneumoniae
P39906 4.98e-24 99 33 6 216 3 aabA Amino-acid-binding protein AabA Dichelobacter nodosus
Q46125 2.19e-23 98 31 7 222 1 hisJ Probable histidine-binding protein Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
O84385 1.5e-21 93 25 5 243 1 artJ Probable ABC transporter arginine-binding protein ArtJ Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
P54952 8.48e-19 85 31 7 221 1 yxeM Probable amino-acid-binding protein YxeM Bacillus subtilis (strain 168)
P45024 3.94e-17 81 27 8 261 1 HI_1080 Probable amino-acid ABC transporter-binding protein HI_1080 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P42199 8.33e-17 80 29 10 235 1 tcyA L-cystine-binding protein TcyA Bacillus subtilis (strain 168)
P27676 7.04e-12 67 26 4 173 3 glnH Glutamine-binding protein Geobacillus stearothermophilus
Q8ZPA3 1.24e-11 65 21 2 185 1 dalS ABC transporter D-alanine-binding periplasmic protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
O34852 8.64e-11 63 23 8 253 1 tcyK L-cystine-binding protein TcyK Bacillus subtilis (strain 168)
P52626 2.05e-10 62 25 6 224 3 patH Putative amino-acid ABC transporter-binding protein PatH Vibrio harveyi
Q01269 1.43e-09 60 24 2 157 1 pheC Cyclohexadienyl dehydratase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9ZF60 1.88e-09 60 23 5 228 3 gltI Glutamate/aspartate import solute-binding protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P42400 1.15e-08 57 22 3 229 1 yckB Probable ABC transporter extracellular-binding protein YckB Bacillus subtilis (strain 168)
P37902 2.31e-08 57 23 5 228 1 gltI Glutamate/aspartate import solute-binding protein Escherichia coli (strain K12)
Q0P9X8 2.47e-08 56 25 6 207 1 peb1A Major cell-binding factor Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
A8ZWR8 4.79e-08 56 22 6 210 3 mltF Membrane-bound lytic murein transglycosylase F Desulfosudis oleivorans (strain DSM 6200 / JCM 39069 / Hxd3)
A1VZQ4 1.08e-07 54 24 6 207 3 peb1A Major cell-binding factor Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176)
O34406 1.91e-07 54 23 6 219 1 tcyJ L-cystine-binding protein TcyJ Bacillus subtilis (strain 168)
Q9I402 1.01e-06 52 28 5 157 1 PA1342 L-glutamate/L-aspartate-binding protein Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q8RQL6 9.34e-06 49 22 7 235 3 gluB Glutamate-binding protein GluB Corynebacterium efficiens (strain DSM 44549 / YS-314 / AJ 12310 / JCM 11189 / NBRC 100395)
P48242 3.42e-05 47 22 8 266 1 gluB Glutamate-binding protein GluB Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q8NQU2 7.47e-05 46 21 7 238 1 argT Arginine-binding protein ArgT Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q02482 0.00013 46 20 4 224 3 Sfri_3689 Putative sensor protein Sfri_3689 Shewanella frigidimarina (strain NCIMB 400)
Q52812 0.000399 44 26 9 247 1 aapJ General L-amino acid-binding periplasmic protein AapJ Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_09190
Feature type CDS
Gene hisJ
Product ABC-type amino acid transport/signal transduction system, periplasmic component/domain
Location 71510 - 72244 (strand: -1)
Length 735 (nucleotides) / 244 (amino acids)

Contig

Accession ZDB_686
Length 191111 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1208
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00497 Bacterial extracellular solute-binding proteins, family 3

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0834 Amino acid transport and metabolism (E)
Signal transduction mechanisms (T)		 ET ABC-type amino acid transport/signal transduction system, periplasmic component/domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02030 polar amino acid transport system substrate-binding protein - -

Protein Sequence

MKKLVIAALIGAFAFSAAAAEKEKIRFATEASYAPFETVNEKNEIVGFDVDLAQAMCAKIDAECTFTNQAFDSLIPSLKYKRFDALMAGIDVTPERQKQVDFTNTYYDNSAVFVAVAGKFDSIDSLKGKQIGIQNGTTHQKYLMEQFKDMKIVPYESYQNAVLDLKGGRIDAVFGDTAVINEWLKSNDNLKTVGERVTDPEYFGTGLAIAVRKGNSELKDKLNKALGEVKADGTYDTLYKKWFE

Flanking regions ( +/- flanking 50bp)

TGTCACACTGATTATTTTCTGCCACTGAACATTAAAAATAGGATGTTGCTATGAAAAAACTGGTTATTGCCGCATTAATCGGCGCGTTTGCTTTCTCCGCAGCGGCGGCAGAAAAAGAAAAAATCCGTTTCGCGACAGAAGCGAGTTATGCCCCGTTTGAAACCGTGAATGAGAAAAACGAAATCGTCGGTTTTGATGTGGATCTGGCTCAGGCGATGTGTGCCAAAATCGATGCGGAATGCACCTTTACCAACCAGGCGTTTGACAGCCTGATCCCGAGCCTGAAATACAAGCGTTTTGACGCGCTGATGGCCGGAATTGACGTCACACCTGAGCGTCAGAAGCAGGTTGATTTCACCAATACCTATTATGATAACTCTGCTGTTTTCGTTGCAGTTGCGGGCAAATTTGATAGCATTGACAGCCTCAAAGGGAAACAGATTGGTATCCAGAACGGCACCACGCATCAGAAATACCTGATGGAGCAGTTTAAGGACATGAAAATTGTGCCTTATGAAAGCTACCAGAACGCGGTACTGGATCTGAAAGGCGGACGTATTGACGCCGTATTCGGTGACACAGCTGTTATCAATGAATGGCTGAAGAGCAACGACAATCTGAAAACCGTGGGTGAGCGCGTCACCGATCCGGAATATTTCGGCACCGGCCTGGCTATTGCGGTCCGCAAGGGCAACAGCGAGCTGAAAGACAAACTCAACAAGGCGCTTGGTGAGGTCAAAGCGGACGGTACTTACGATACCCTCTATAAGAAATGGTTTGAGTAATAACATAAAAAATTAATGAACGATTTTCTCTCTTTAGCAAGCGCCGCCGG