Homologs in group_2906

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13295 FBDBKF_13295 100.0 Morganella morganii S1 - Integrase-like protein
EHELCC_08800 EHELCC_08800 100.0 Morganella morganii S2 - Integrase-like protein
NLDBIP_09125 NLDBIP_09125 100.0 Morganella morganii S4 - Integrase-like protein
LHKJJB_05140 LHKJJB_05140 100.0 Morganella morganii S3 - Integrase-like protein
PMI_RS12305 PMI_RS12305 41.8 Proteus mirabilis HI4320 - integrase family protein

Distribution of the homologs in the orthogroup group_2906

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2906

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P06155 3.6e-40 150 29 13 403 3 int Integrase Enterobacteria phage phi80
P08320 3.91e-16 83 24 4 303 3 int Integrase Enterobacteria phage P4
P32053 4.27e-16 83 24 16 418 1 intA Prophage integrase IntA Escherichia coli (strain K12)
P39347 4.44e-12 70 25 4 270 5 intB Putative protein IntB Escherichia coli (strain K12)
P76542 4.92e-10 64 21 10 378 3 intZ Prophage integrase IntZ Escherichia coli (strain K12)
P37317 2.21e-07 56 23 12 385 3 int Integrase Shigella phage Sf6
P37326 2.61e-07 55 23 11 385 1 intS Prophage integrase IntS Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_05775
Feature type CDS
Gene -
Product Integrase-like protein
Location 221555 - 222778 (strand: 1)
Length 1224 (nucleotides) / 407 (amino acids)

Contig

Accession ZDB_682
Length 259781 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2906
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00589 Phage integrase family
PF13356 Arm DNA-binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0582 Replication, recombination and repair (L)
Mobilome: prophages, transposons (X)		 LX Integrase/recombinase, includes phage integrase

Protein Sequence

MALTDSWLRSVSGKTAEKIVTKADRDGLSVRVTPKGKVIFQFRYRWDGKAERIDVGTYPATSLKDAREAALFYRGELEQLRNPRVVKQNKIQRAVTAKTVEGVIRLWWEKSMDGVKVNAKQILRSFEIHVFPKIGQYPHDETDLHMWLSLIEALAERYPAVADKVLQNTKLAHAWGIRRSVINNSPLESVSSADLGIVENQGERVLSDDEIRLLFSLIDEPRYNLRNRCIIKLCLLYGNRIGELMKAKVKHFDFTERVWTVPPENHKTGRKSKKPILRPIIDPAEVLLRELITINNGSEYLLPSPNGGKLTQGGHLYIPVLLNKKMAPHFDEYTTWSIHDLRKTMRTRMSEITAPHVAEIMIGHKLPGVWQVYDKYTYLNEQRKGYEEWWDKLTKIAYHSPSQKYPA

Flanking regions ( +/- flanking 50bp)

CTGTGTACATAAAATATCATCTTAGCAGCTAATTTTTGAGGTTAAGAGATATGGCATTAACAGATTCATGGCTCCGTTCAGTATCAGGTAAAACTGCGGAAAAAATAGTAACAAAAGCAGACCGGGATGGGTTATCAGTCAGGGTAACCCCAAAGGGAAAGGTTATATTTCAGTTTCGTTACCGCTGGGATGGAAAAGCCGAAAGAATTGATGTAGGGACATACCCTGCTACCAGCCTGAAAGATGCCAGGGAGGCCGCTCTGTTTTATCGTGGTGAACTTGAGCAATTGCGAAACCCGCGTGTCGTAAAGCAGAATAAAATACAGCGGGCAGTTACGGCGAAAACTGTTGAGGGAGTAATTCGTTTATGGTGGGAAAAATCCATGGACGGTGTGAAGGTCAACGCCAAACAGATCCTCCGCTCCTTTGAGATTCATGTATTTCCAAAAATAGGGCAGTATCCGCATGATGAAACTGATCTGCATATGTGGCTTTCATTGATTGAAGCACTGGCCGAACGCTATCCGGCAGTTGCTGATAAAGTATTGCAAAACACGAAACTAGCCCATGCGTGGGGTATTCGTCGTAGTGTGATTAATAACAGTCCTTTGGAGAGCGTTTCATCTGCAGATCTTGGTATTGTTGAAAATCAGGGTGAAAGGGTTCTGTCTGATGACGAAATAAGGCTGCTATTTTCATTGATAGATGAGCCGCGCTACAACCTCAGAAACCGCTGTATTATTAAGTTGTGTCTACTCTACGGGAATAGGATCGGTGAGTTGATGAAGGCCAAAGTTAAGCATTTTGATTTCACCGAACGAGTCTGGACTGTTCCGCCAGAAAACCATAAAACCGGACGCAAAAGTAAAAAGCCAATTTTAAGGCCGATAATTGATCCGGCAGAGGTATTGCTGCGTGAACTGATAACCATTAACAATGGTAGTGAATATCTTTTGCCATCTCCTAACGGTGGAAAATTAACACAGGGTGGGCACCTTTATATTCCCGTATTGCTTAATAAAAAAATGGCCCCCCATTTTGATGAATACACTACATGGTCTATACACGATCTGAGAAAAACTATGCGGACCCGCATGTCAGAAATAACTGCGCCACATGTTGCAGAAATTATGATCGGCCATAAATTACCGGGGGTATGGCAGGTGTACGATAAGTACACCTACCTGAATGAGCAAAGAAAAGGGTATGAGGAGTGGTGGGATAAACTGACTAAAATCGCTTACCATTCTCCCAGTCAAAAATATCCTGCTTGAGAAAAATTAATTCTTTTGATTTAAATTTTGGCTTCGGGAAACCTTCGCGT