Homologs in group_1828

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13295 FBDBKF_13295 26.6 Morganella morganii S1 - Integrase-like protein
EHELCC_08800 EHELCC_08800 26.6 Morganella morganii S2 - Integrase-like protein
NLDBIP_09125 NLDBIP_09125 26.6 Morganella morganii S4 - Integrase-like protein
LHKJJB_05140 LHKJJB_05140 26.6 Morganella morganii S3 - Integrase-like protein
HKOGLL_05775 HKOGLL_05775 26.6 Morganella morganii S5 - Integrase-like protein
PMI_RS12305 PMI_RS12305 29.8 Proteus mirabilis HI4320 - integrase family protein

Distribution of the homologs in the orthogroup group_1828

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1828

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P06155 2.66e-11 68 24 6 272 3 int Integrase Enterobacteria phage phi80
P32053 2.05e-10 65 21 6 273 1 intA Prophage integrase IntA Escherichia coli (strain K12)
P76542 1.33e-06 53 26 8 220 3 intZ Prophage integrase IntZ Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS18035
Feature type CDS
Gene -
Product site-specific integrase
Location 52254 - 53363 (strand: -1)
Length 1110 (nucleotides) / 369 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000008
Length 103951 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1828
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00589 Phage integrase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0582 Replication, recombination and repair (L)
Mobilome: prophages, transposons (X)		 LX Integrase/recombinase, includes phage integrase

Protein Sequence

MKKQAASEPYELTEHVSKLTAEYVTSIRISSLTTLEEKIFADRNVRNIFNLWLRVSLFLTRRRPEIAVSSMLNHFLPVVGDLPVEKCSKITLNHVFNKLLSDGHVNEAKRVFALSKQFLTWCEHQGYIESNPLASMTRKDVGGKTPEPRERALSDAEIWCFWYGLDMWDFSDQIRWGLRFCLLAARRPDEVFRARKREFDLESGIWRQGDRNKSRREHSLPLSPLMKECVRNLFSATPDSEWLCPARLSHDIPISKGAPAQAIRRMIRDYAGFGLDEFTPRDLRRTARTKLSELGMQNDVSRKIMNHALEGIDRVYDRYSYFDHMREALDTYSNEVKRIIETDSYRQLMHDFEVGGLRLPPTSKVYCTG

Flanking regions ( +/- flanking 50bp)

CTATATTTAGCCTTATAGAATAATAATCAGAATCCATCATAAGGCTCACCATGAAAAAGCAGGCTGCTTCCGAACCGTATGAGCTGACTGAGCACGTCAGTAAATTGACGGCGGAATATGTAACAAGCATACGTATTTCATCACTTACCACATTAGAGGAAAAGATATTTGCTGATAGGAATGTCAGGAATATTTTCAACCTCTGGTTACGTGTTTCCTTATTCTTAACCCGCCGGCGACCGGAAATAGCTGTGTCCTCAATGCTGAATCACTTTCTTCCGGTTGTAGGTGATCTTCCTGTTGAAAAATGCTCTAAAATTACCTTGAACCATGTATTCAACAAACTACTCTCGGATGGTCATGTAAATGAAGCCAAACGGGTCTTTGCATTGTCAAAACAGTTCCTGACGTGGTGTGAGCATCAGGGCTACATCGAGAGCAATCCGCTGGCTTCTATGACACGTAAAGATGTCGGCGGTAAAACCCCTGAGCCACGCGAACGTGCGCTGTCTGATGCTGAAATATGGTGTTTCTGGTATGGCCTGGATATGTGGGATTTCAGTGATCAAATCAGGTGGGGGTTACGGTTTTGTCTTCTTGCCGCACGTCGGCCAGATGAGGTATTCAGGGCAAGAAAACGTGAGTTTGATTTAGAGTCCGGTATCTGGCGGCAAGGAGACAGAAATAAATCTAGACGTGAGCACTCACTACCTCTAAGCCCCTTAATGAAAGAGTGTGTCCGTAATCTATTCAGCGCAACACCTGACAGCGAATGGCTATGTCCGGCCAGACTGAGCCATGATATCCCGATATCAAAAGGTGCTCCGGCCCAGGCAATTCGCCGAATGATCCGGGACTACGCTGGGTTTGGCCTAGATGAGTTTACTCCCCGCGATTTACGACGAACCGCGCGTACTAAACTGTCTGAGTTAGGTATGCAGAATGACGTTTCACGAAAGATAATGAATCATGCATTGGAGGGCATTGACCGTGTGTATGACAGGTACAGTTACTTCGATCACATGAGAGAGGCGTTAGATACGTATTCAAATGAAGTGAAAAGAATCATAGAAACTGATTCTTACCGGCAGTTAATGCATGATTTTGAGGTCGGTGGATTGAGACTACCACCGACCTCAAAAGTATATTGCACTGGTTAGTCTTGTGTCGCCTTTTTTATAAATTCATCGGCTCTGATCGCGGCGAGGTT