Homologs in group_2987

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17095 FBDBKF_17095 28.6 Morganella morganii S1 - Integrase
EHELCC_01795 EHELCC_01795 28.6 Morganella morganii S2 - Integrase
NLDBIP_01665 NLDBIP_01665 28.6 Morganella morganii S4 - Integrase
LHKJJB_00370 LHKJJB_00370 28.6 Morganella morganii S3 - Integrase
HKOGLL_00410 HKOGLL_00410 28.6 Morganella morganii S5 - Integrase

Distribution of the homologs in the orthogroup group_2987

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2987

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P06155 2.66e-11 68 24 6 272 3 int Integrase Enterobacteria phage phi80
P32053 2.05e-10 65 21 6 273 1 intA Prophage integrase IntA Escherichia coli (strain K12)
P76542 1.33e-06 53 26 8 220 3 intZ Prophage integrase IntZ Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS18035
Feature type CDS
Gene -
Product site-specific integrase
Location 52254 - 53363 (strand: -1)
Length 1110 (nucleotides) / 369 (amino acids)

Contig

Accession term accessions NZ_VXKB01000008 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 103951 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2987
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00589 Phage integrase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0582 Replication, recombination and repair (L)
Mobilome: prophages, transposons (X)		 LX Integrase/recombinase, includes phage integrase

Protein Sequence

MKKQAASEPYELTEHVSKLTAEYVTSIRISSLTTLEEKIFADRNVRNIFNLWLRVSLFLTRRRPEIAVSSMLNHFLPVVGDLPVEKCSKITLNHVFNKLLSDGHVNEAKRVFALSKQFLTWCEHQGYIESNPLASMTRKDVGGKTPEPRERALSDAEIWCFWYGLDMWDFSDQIRWGLRFCLLAARRPDEVFRARKREFDLESGIWRQGDRNKSRREHSLPLSPLMKECVRNLFSATPDSEWLCPARLSHDIPISKGAPAQAIRRMIRDYAGFGLDEFTPRDLRRTARTKLSELGMQNDVSRKIMNHALEGIDRVYDRYSYFDHMREALDTYSNEVKRIIETDSYRQLMHDFEVGGLRLPPTSKVYCTG

Flanking regions ( +/- flanking 50bp)

CTATATTTAGCCTTATAGAATAATAATCAGAATCCATCATAAGGCTCACCATGAAAAAGCAGGCTGCTTCCGAACCGTATGAGCTGACTGAGCACGTCAGTAAATTGACGGCGGAATATGTAACAAGCATACGTATTTCATCACTTACCACATTAGAGGAAAAGATATTTGCTGATAGGAATGTCAGGAATATTTTCAACCTCTGGTTACGTGTTTCCTTATTCTTAACCCGCCGGCGACCGGAAATAGCTGTGTCCTCAATGCTGAATCACTTTCTTCCGGTTGTAGGTGATCTTCCTGTTGAAAAATGCTCTAAAATTACCTTGAACCATGTATTCAACAAACTACTCTCGGATGGTCATGTAAATGAAGCCAAACGGGTCTTTGCATTGTCAAAACAGTTCCTGACGTGGTGTGAGCATCAGGGCTACATCGAGAGCAATCCGCTGGCTTCTATGACACGTAAAGATGTCGGCGGTAAAACCCCTGAGCCACGCGAACGTGCGCTGTCTGATGCTGAAATATGGTGTTTCTGGTATGGCCTGGATATGTGGGATTTCAGTGATCAAATCAGGTGGGGGTTACGGTTTTGTCTTCTTGCCGCACGTCGGCCAGATGAGGTATTCAGGGCAAGAAAACGTGAGTTTGATTTAGAGTCCGGTATCTGGCGGCAAGGAGACAGAAATAAATCTAGACGTGAGCACTCACTACCTCTAAGCCCCTTAATGAAAGAGTGTGTCCGTAATCTATTCAGCGCAACACCTGACAGCGAATGGCTATGTCCGGCCAGACTGAGCCATGATATCCCGATATCAAAAGGTGCTCCGGCCCAGGCAATTCGCCGAATGATCCGGGACTACGCTGGGTTTGGCCTAGATGAGTTTACTCCCCGCGATTTACGACGAACCGCGCGTACTAAACTGTCTGAGTTAGGTATGCAGAATGACGTTTCACGAAAGATAATGAATCATGCATTGGAGGGCATTGACCGTGTGTATGACAGGTACAGTTACTTCGATCACATGAGAGAGGCGTTAGATACGTATTCAAATGAAGTGAAAAGAATCATAGAAACTGATTCTTACCGGCAGTTAATGCATGATTTTGAGGTCGGTGGATTGAGACTACCACCGACCTCAAAAGTATATTGCACTGGTTAGTCTTGTGTCGCCTTTTTTATAAATTCATCGGCTCTGATCGCGGCGAGGTT