Homologs in group_226

Help

7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01785 FBDBKF_01785 100.0 Morganella morganii S1 endA Endonuclease I
EHELCC_02255 EHELCC_02255 100.0 Morganella morganii S2 endA Endonuclease I
NLDBIP_01205 NLDBIP_01205 100.0 Morganella morganii S4 endA Endonuclease I
LHKJJB_00830 LHKJJB_00830 100.0 Morganella morganii S3 endA Endonuclease I
F4V73_RS04110 F4V73_RS04110 82.0 Morganella psychrotolerans - endonuclease
PMI_RS06970 PMI_RS06970 64.2 Proteus mirabilis HI4320 - endonuclease
PMI_RS12120 PMI_RS12120 52.1 Proteus mirabilis HI4320 - endonuclease

Distribution of the homologs in the orthogroup group_226

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_226

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P25736 1.4e-72 226 56 3 186 1 endA Endonuclease-1 Escherichia coli (strain K12)
P37994 2.11e-71 223 54 3 186 2 nucM Nuclease NucM Dickeya dadantii (strain 3937)
P08038 2.02e-66 210 52 1 185 1 dns Extracellular deoxyribonuclease Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P57487 2.38e-64 205 47 3 186 3 endA Endonuclease-1 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89AD7 5.7e-64 204 45 3 195 3 endA Endonuclease-1 Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
O31222 4.28e-60 194 50 5 197 3 None Extracellular deoxyribonuclease Aeromonas hydrophila
Q44064 5.88e-60 194 51 4 186 3 dnsH Periplasmic deoxyribonuclease Aeromonas hydrophila
P39658 4.87e-59 191 51 4 186 3 dns Extracellular deoxyribonuclease Aeromonas hydrophila
Q9WVZ1 4.65e-17 81 28 6 199 3 endX Extracellular endonuclease Pseudomonas fluorescens biotype A
O32150 9.7e-07 52 29 5 129 3 bsn Extracellular ribonuclease Bacillus subtilis (strain 168)
Q03091 7.2e-06 50 28 5 129 1 bsn Extracellular ribonuclease Bacillus amyloliquefaciens

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_00870
Feature type CDS
Gene endA
Product Endonuclease I
Location 150958 - 151845 (strand: 1)
Length 888 (nucleotides) / 295 (amino acids)
In genomic island -

Contig

Accession ZDB_679
Length 398279 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_226
Orthogroup size 8
N. genomes 7

Actions

Genomic region

Domains

PF02805 Metal binding domain of Ada
PF04231 Endonuclease I

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2356 Replication, recombination and repair (L) L Endonuclease I

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01150 deoxyribonuclease I [EC:3.1.21.1] - -

Protein Sequence

MAREKIYYDQNRNLQGEGTLYCGCQWEWTGKSGGRVDLNSCGYRVRSQVTRAERIEWEHIVPAWVFGHQRQCWQNGGRKNCVSEDPVFRAMEADLHNLAPSVGEVNGDRSNFRYGIARGAGSQSYGQCTSRVDFKQRVFEPRDEVKGEVARVWFYMHDRYDLAMSEQQQKLLMVWDSEFPPSAAERERDRRIRAVTGQSNPFVTGERRWELGHINSADGIFTRLPSAPVTPVNVPPKAEKKATDQRIRGNRSSKIYHFPDCPGYNRISSKNVEMFSDAASAQAAGYSMAKNCKAR

Flanking regions ( +/- flanking 50bp)

CGTCTGCGGTATTTGCAGCTGCGCCGGAACGGTTTGACGAGGCCAAAATAGTGGCCCGTGAGAAGATCTATTACGATCAGAACCGTAACCTGCAGGGGGAAGGGACACTGTATTGCGGCTGTCAGTGGGAATGGACCGGAAAATCCGGCGGCCGGGTGGATCTGAACAGCTGCGGTTACCGTGTACGGTCACAGGTGACCCGCGCAGAGCGGATTGAGTGGGAGCATATTGTTCCTGCCTGGGTGTTCGGGCATCAGCGCCAGTGCTGGCAGAACGGCGGGCGCAAAAACTGTGTCAGTGAGGACCCGGTCTTCCGTGCAATGGAAGCCGATCTCCACAACCTGGCGCCGTCTGTCGGCGAAGTCAACGGGGATCGCAGTAATTTTCGTTACGGGATCGCACGCGGCGCCGGTTCACAGAGCTACGGGCAGTGCACCAGCCGGGTGGATTTTAAGCAGCGGGTTTTCGAGCCGCGCGATGAAGTCAAAGGCGAGGTGGCGCGGGTCTGGTTCTATATGCATGACCGCTACGATCTGGCAATGTCAGAACAGCAGCAGAAATTACTGATGGTGTGGGACAGCGAATTTCCGCCGTCTGCCGCCGAGCGGGAACGGGATCGCCGTATCCGTGCGGTTACCGGGCAGTCAAACCCGTTTGTGACCGGCGAACGCCGCTGGGAGCTGGGGCATATCAACAGTGCTGACGGTATTTTTACCCGCCTGCCATCCGCGCCGGTGACACCGGTAAACGTACCGCCGAAAGCAGAAAAGAAAGCAACGGATCAGCGTATCCGCGGTAACCGCAGCAGTAAGATTTACCATTTTCCGGATTGCCCGGGCTATAACCGGATCAGCAGTAAAAATGTTGAAATGTTCTCTGATGCCGCCTCTGCACAGGCCGCAGGGTACAGCATGGCGAAGAACTGCAAAGCACGCTGATGTGCGGCGGATAACAGAAATGTGGCAAAAATGTTAAATATCCGCCGATT