Homologs in group_226

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01785 FBDBKF_01785 82.0 Morganella morganii S1 endA Endonuclease I
EHELCC_02255 EHELCC_02255 82.0 Morganella morganii S2 endA Endonuclease I
NLDBIP_01205 NLDBIP_01205 82.0 Morganella morganii S4 endA Endonuclease I
LHKJJB_00830 LHKJJB_00830 82.0 Morganella morganii S3 endA Endonuclease I
HKOGLL_00870 HKOGLL_00870 82.0 Morganella morganii S5 endA Endonuclease I
PMI_RS06970 PMI_RS06970 60.3 Proteus mirabilis HI4320 - endonuclease
PMI_RS12120 PMI_RS12120 48.4 Proteus mirabilis HI4320 - endonuclease

Distribution of the homologs in the orthogroup group_226

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_226

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P25736 1.57e-76 237 58 3 186 1 endA Endonuclease-1 Escherichia coli (strain K12)
P37994 1.4e-75 235 50 6 235 2 nucM Nuclease NucM Dickeya dadantii (strain 3937)
P08038 4.31e-73 228 49 4 233 1 dns Extracellular deoxyribonuclease Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P57487 3.44e-65 209 40 5 235 3 endA Endonuclease-1 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89AD7 5.76e-65 208 41 5 241 3 endA Endonuclease-1 Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
O31222 1.74e-62 201 46 7 241 3 None Extracellular deoxyribonuclease Aeromonas hydrophila
Q44064 1.95e-61 199 52 4 186 3 dnsH Periplasmic deoxyribonuclease Aeromonas hydrophila
P39658 6.06e-60 195 52 4 186 3 dns Extracellular deoxyribonuclease Aeromonas hydrophila
Q9WVZ1 5e-25 103 30 7 238 3 endX Extracellular endonuclease Pseudomonas fluorescens biotype A
O32150 8.12e-06 50 29 5 128 3 bsn Extracellular ribonuclease Bacillus subtilis (strain 168)
Q03091 4.92e-05 48 28 4 128 1 bsn Extracellular ribonuclease Bacillus amyloliquefaciens

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04110
Feature type CDS
Gene -
Product endonuclease
Location 869041 - 870045 (strand: 1)
Length 1005 (nucleotides) / 334 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_226
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF04231 Endonuclease I

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2356 Replication, recombination and repair (L) L Endonuclease I

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01150 deoxyribonuclease I [EC:3.1.21.1] - -

Protein Sequence

MISMRILKLFSLSLFAFFLTLSAAFAAAPERFDEAKIVSREQVYHDQNRDPQGEGTLYCGCQWEWTGKSGGRVDLNSCGYQVRSQQTRAERIEWEHIVPAWVFGHQRQCWQQGGRKNCISEDPVFRAMEADLHNLAPSIGEVNGDRSNFRYSMARGAGTKSYGQCTSRVDFKQRVFEPRDEVKGQVARVWFYMHDRYDLAMSEQQQKLLITWDATYPPSAWERERDLRIRAVTGQSNPFVTGERHWEPGHINTADGIFTRLPSAPVQTTPVKTTTSPVKKTENKTIRANRNSKIYHHQDCPGYNRVSAKNSEYFPDAISAEAAGYIAAKNCKVR

Flanking regions ( +/- flanking 50bp)

TATCCGTGTCTGACATGGCATAATTGCCGCCCTCATTATTCTGTTGGTATATGATTTCTATGCGTATTTTAAAATTATTTAGTTTGTCATTATTTGCATTTTTCCTGACATTATCCGCGGCGTTTGCCGCTGCACCTGAACGGTTTGATGAGGCAAAAATTGTGTCCCGTGAGCAGGTGTATCATGATCAGAACCGCGACCCGCAGGGCGAGGGAACACTCTATTGCGGCTGTCAGTGGGAGTGGACAGGAAAATCAGGCGGCAGGGTGGATCTGAACAGTTGTGGCTATCAGGTGCGGTCACAGCAAACCCGTGCAGAACGGATTGAGTGGGAACACATTGTACCGGCCTGGGTGTTTGGACATCAGCGCCAGTGCTGGCAGCAGGGCGGACGAAAAAACTGTATCAGCGAAGATCCGGTATTCCGCGCGATGGAAGCCGATCTCCATAATCTGGCACCCTCCATTGGTGAAGTGAATGGCGACCGCAGTAATTTCCGTTACAGTATGGCCCGCGGTGCGGGAACCAAGAGTTACGGGCAATGCACCAGCCGGGTGGATTTTAAGCAGCGGGTGTTTGAACCGCGTGATGAGGTAAAAGGACAGGTTGCCCGGGTTTGGTTCTATATGCATGATCGCTATGATCTGGCGATGTCAGAGCAGCAGCAGAAACTCCTGATAACCTGGGATGCAACTTATCCGCCATCAGCCTGGGAGCGTGAACGCGACCTTCGTATCCGCGCGGTGACCGGGCAATCAAACCCGTTTGTGACCGGTGAGCGCCACTGGGAGCCGGGTCATATCAATACTGCCGACGGAATTTTTACCCGCCTGCCTTCTGCGCCGGTTCAGACAACACCGGTAAAAACGACGACATCTCCGGTGAAAAAAACGGAAAATAAGACTATCCGTGCTAACCGTAACAGTAAAATTTATCACCATCAGGATTGTCCCGGCTATAACCGGGTCAGTGCAAAAAACAGTGAATATTTCCCGGATGCGATTTCAGCAGAAGCGGCAGGGTATATAGCAGCAAAAAACTGCAAAGTGCGCTGAGGTCCGTAACATTGTCATTATACTGTCACACAGTCAGTTTAGTGTTCGCT