COG2356


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG2356, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Endonuclease I
Function(s) descr. Replication, recombination and repair (L)

Occurence in the database

COG2356 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_237 FBDBKF_01785 45078 45965 1 endA Endonuclease I Morganella morganii S1
1 group_237 EHELCC_02255 432898 433785 1 endA Endonuclease I Morganella morganii S2
2 group_237 NLDBIP_01205 246351 247238 -1 endA Endonuclease I Morganella morganii S4
3 group_237 LHKJJB_00830 145447 146334 1 endA Endonuclease I Morganella morganii S3
4 group_237 HKOGLL_00870 150958 151845 1 endA Endonuclease I Morganella morganii S5
5 group_237 F4V73_RS04110 869041 870045 1 endonuclease Morganella psychrotolerans
6 group_237 PMI_RS06970 1524779 1525756 -1 endonuclease Proteus mirabilis HI4320
7 group_237 PMI_RS12120 2678515 2679189 1 endonuclease Proteus mirabilis HI4320