Homologs in group_3387

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_08905 EHELCC_08905 100.0 Morganella morganii S2 - Helicase
NLDBIP_09230 NLDBIP_09230 100.0 Morganella morganii S4 - Helicase
LHKJJB_05035 LHKJJB_05035 100.0 Morganella morganii S3 - Helicase
HKOGLL_05880 HKOGLL_05880 100.0 Morganella morganii S5 - Helicase

Distribution of the homologs in the orthogroup group_3387

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3387

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P24125 2.03e-27 118 26 11 382 4 None 51.5 kDa protein Lactococcus phage (isolate 7-9)
Q06683 3.04e-23 107 30 9 282 1 IRC3 Putative ATP-dependent helicase IRC3 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P33919 2.94e-18 91 24 16 433 1 radD Putative DNA repair helicase RadD Escherichia coli (strain K12)
Q1MTR1 1.18e-17 89 26 13 358 3 irc3 Putative mitochondrial ATP-dependent helicase irc3 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q971U1 2.59e-08 60 24 13 349 1 xpb1 DNA 3'-5' helicase/translocase StoXPB1 Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_13190
Feature type CDS
Gene -
Product Helicase
Location 27210 - 28787 (strand: -1)
Length 1578 (nucleotides) / 525 (amino acids)

Contig

Accession contig_16
Length 109220 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3387
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF00271 Helicase conserved C-terminal domain
PF04851 Type III restriction enzyme, res subunit

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1061 Transcription (K)
Replication, recombination and repair (L)		 KL Superfamily II DNA or RNA helicase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19789 DNA repair protein RadD - -

Protein Sequence

MLTITPNFAQERALRLLRSEWKSHRTFMISSPTGSGKTALAAFITHGCNSRNMRVMFVVPYTILIEQTAARFIDYGIPMEDIGFVWRDHPNYDPTRLIQIASADTLIRREFPDNIDLLFIDEAHLRRKKLLEVIRDNEFKVIGLSGTPFSPFLGTYYERLIKPTTMKELIERGDLSPYEFYAPTKPDLSAVKSTSSAEYGSDYKEAEIAAIMSGADLVGDVVDNWLANGQNLPTICFCVTVSHANFVTIAFNRAGVNAEIITADTPHEERQLIIHRFEQGGTKIIVNVGTLVAGFDSDVRCIIYARPTKSEIRWVQCLGRGLRKAQGKDKCLIFDHSGSVHRLGFPDDIEYDELPGKSDGMEESSSARDQEKREKKPKECTSCHYMKPAGVYVCPKCGFKPLAGEDIDVDTSRNIKKMGKSEKVYTTKDKQSFYSQLKYYQNIRATEGKPVSDGWVSNTFRDKFGEWPRSLHATPQEITPEVSNFITHKRIQWVKRKQKTEALMPQRIADLKQQLNKNAQQGELL

Flanking regions ( +/- flanking 50bp)

TACCCCTCTCCTTGGCAGTGCTACCTGGTCGATAAAATTGAGGTAATGGCATGTTAACTATCACACCAAATTTTGCACAGGAAAGAGCACTACGGTTATTGCGCAGCGAGTGGAAATCACACCGCACGTTCATGATCAGCAGTCCGACCGGCAGCGGTAAAACAGCGCTGGCTGCATTCATCACGCACGGTTGCAACAGCCGTAATATGCGGGTGATGTTTGTTGTGCCGTATACGATCCTGATTGAACAGACCGCAGCACGGTTTATCGATTACGGGATTCCGATGGAAGATATCGGTTTTGTCTGGCGTGATCATCCGAACTATGACCCTACACGACTGATCCAGATTGCCTCAGCCGATACGCTGATCCGCCGTGAATTCCCGGACAACATCGATCTGCTGTTTATCGATGAGGCCCATCTGCGCCGTAAAAAATTGCTGGAAGTTATCCGCGATAATGAATTTAAGGTGATTGGCCTGTCCGGCACACCGTTTTCTCCGTTCCTGGGGACGTATTACGAAAGACTGATCAAACCCACCACGATGAAAGAACTGATCGAGCGCGGGGACCTGAGTCCGTATGAGTTTTACGCCCCGACAAAGCCGGATCTTTCTGCGGTTAAATCCACCAGCAGTGCAGAGTACGGCAGCGATTACAAAGAGGCTGAGATAGCGGCAATCATGTCGGGTGCGGATCTGGTCGGTGACGTGGTCGATAACTGGCTGGCCAACGGTCAGAACCTGCCGACCATCTGTTTTTGTGTGACCGTCAGCCATGCAAATTTCGTCACGATAGCGTTTAACCGGGCGGGTGTGAATGCTGAGATTATTACCGCAGATACCCCGCATGAAGAGCGTCAGCTTATCATCCACCGCTTTGAGCAGGGCGGAACAAAAATCATCGTGAACGTCGGCACACTGGTTGCCGGGTTTGACAGCGATGTCCGGTGCATCATTTACGCCCGTCCGACGAAATCGGAAATTCGCTGGGTGCAGTGTCTCGGCCGCGGACTGCGTAAAGCACAAGGCAAAGATAAATGCCTTATTTTCGATCACTCCGGATCTGTGCACCGCCTGGGTTTTCCTGATGATATCGAATATGACGAATTACCGGGTAAAAGTGACGGCATGGAAGAATCATCTTCTGCCCGTGACCAGGAAAAGCGGGAGAAAAAGCCGAAGGAATGCACATCCTGTCACTACATGAAGCCTGCCGGTGTTTACGTCTGCCCGAAATGTGGATTCAAACCGCTGGCCGGTGAAGATATCGACGTTGATACCTCCCGCAACATCAAAAAAATGGGTAAATCCGAGAAGGTTTACACCACAAAAGACAAACAGAGCTTTTACTCCCAGCTCAAATATTACCAGAACATCCGCGCCACCGAAGGAAAGCCGGTCAGTGACGGGTGGGTCTCAAATACTTTCAGAGATAAGTTCGGTGAATGGCCGCGCAGCCTGCATGCCACACCGCAGGAAATAACCCCGGAGGTATCCAATTTCATCACACACAAACGTATTCAGTGGGTTAAGCGTAAACAGAAAACCGAAGCACTGATGCCGCAGAGAATCGCAGATTTAAAACAGCAACTGAATAAAAACGCACAGCAGGGAGAATTATTGTGAATACAGCTGAAGCAGCAAAGGGGCAGTGGGAAAAGATTTTTGCACACTAC