Orthogroup:group_3387


Homologs in group_3387

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
FBDBKF_13190 FBDBKF_13190 Morganella morganii S1 - Helicase
EHELCC_08905 EHELCC_08905 Morganella morganii S2 - Helicase
NLDBIP_09230 NLDBIP_09230 Morganella morganii S4 - Helicase
LHKJJB_05035 LHKJJB_05035 Morganella morganii S3 - Helicase
HKOGLL_05880 HKOGLL_05880 Morganella morganii S5 - Helicase

Distribution of group_3387 homologs

Help

Number of homologs in each genome (first column and blue bar chart)

Download SVG

Phylogeny of group_3387 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3387

Orthogroup content: 5 members

Help

This page summarizes the annotation of all members of the orthologous group group_3387.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 5

Product

# Product Occurence
1 Helicase 5

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG1061 5 KL Transcription (K)
Replication, recombination and repair (L)		 Superfamily II DNA or RNA helicase

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K19789 5 DNA repair protein RadD - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00271 5 Helicase conserved C-terminal domain
PF04851 5 Type III restriction enzyme, res subunit

Annotations of the 5 SwissProt hits

Annotation Number of occurrences
51.5 kDa protein 1
DNA 3'-5' helicase/translocase StoXPB1 1
Putative ATP-dependent helicase IRC3 1
Putative DNA repair helicase RadD 1
Putative mitochondrial ATP-dependent helicase irc3 1

Protein length

Unique protein length 525

Protein length distribution