Homologs in group_1286

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_13645 EHELCC_13645 100.0 Morganella morganii S2 fixJ DNA-binding response regulator, FixJ family, consists of REC and HTH domains
NLDBIP_14090 NLDBIP_14090 100.0 Morganella morganii S4 fixJ DNA-binding response regulator, FixJ family, consists of REC and HTH domains
LHKJJB_08760 LHKJJB_08760 100.0 Morganella morganii S3 fixJ DNA-binding response regulator, FixJ family, consists of REC and HTH domains
HKOGLL_08310 HKOGLL_08310 100.0 Morganella morganii S5 fixJ DNA-binding response regulator, FixJ family, consists of REC and HTH domains
F4V73_RS13230 F4V73_RS13230 94.7 Morganella psychrotolerans - LuxR C-terminal-related transcriptional regulator
PMI_RS10800 PMI_RS10800 53.6 Proteus mirabilis HI4320 - LuxR C-terminal-related transcriptional regulator

Distribution of the homologs in the orthogroup group_1286

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1286

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P23221 8.7e-23 94 28 1 182 3 fixJ Transcriptional regulatory protein FixJ Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
P26487 1.96e-22 93 28 2 193 3 fixJ Transcriptional regulatory protein FixJ Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571)
P10958 1.64e-21 90 28 1 196 1 fixJ Transcriptional regulatory protein FixJ Rhizobium meliloti (strain 1021)
Q8KR08 1.63e-20 88 28 1 203 1 tmoT Response regulator protein TmoT Pseudomonas mendocina
Q3LWR6 2.19e-20 88 27 1 202 3 todT Response regulator protein TodT Pseudomonas putida
I7CA98 2.19e-20 88 27 1 202 1 todT Response regulator protein TodT Pseudomonas putida (strain DOT-T1E)
A5W4E2 2.19e-20 88 27 1 202 1 todT Response regulator protein TodT Pseudomonas putida (strain ATCC 700007 / DSM 6899 / JCM 31910 / BCRC 17059 / LMG 24140 / F1)
O87940 3.74e-20 87 27 1 181 1 tdiR Transcriptional regulatory protein TdiR Thauera aromatica
P37740 2.81e-18 82 26 4 199 3 dctR C4-dicarboxylate transport transcriptional regulatory protein DctR Rhodobacter capsulatus
P15940 1.68e-15 75 27 1 174 3 nodW Nodulation protein W Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
Q7CQM8 6.43e-13 68 21 2 198 1 ttrR Tetrathionate response regulatory protein TtrR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
O34723 4.16e-09 57 26 5 187 1 desR Transcriptional regulatory protein DesR Bacillus subtilis (strain 168)
P27667 5.4e-09 57 28 2 132 3 uhpA Transcriptional regulatory protein UhpA Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0AEL8 1.6e-08 55 24 1 158 3 fimZ Fimbriae Z protein Escherichia coli (strain K12)
P0AEL9 1.6e-08 55 24 1 158 3 fimZ Fimbriae Z protein Escherichia coli O157:H7
P0AGA9 1.7e-08 55 27 2 132 3 uhpA Transcriptional regulatory protein UhpA Shigella flexneri
P0AGA6 1.7e-08 55 27 2 132 1 uhpA Transcriptional regulatory protein UhpA Escherichia coli (strain K12)
P0AGA7 1.7e-08 55 27 2 132 3 uhpA Transcriptional regulatory protein UhpA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AGA8 1.7e-08 55 27 2 132 3 uhpA Transcriptional regulatory protein UhpA Escherichia coli O157:H7
P0A4H2 1.67e-07 53 24 1 157 1 bvgA Virulence factors putative positive transcription regulator BvgA Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P0A4H4 1.67e-07 53 24 1 157 3 bvgA Virulence factors putative positive transcription regulator BvgA Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253)
P0A4H3 1.67e-07 53 24 1 157 3 bvgA Virulence factors putative positive transcription regulator BvgA Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
P26319 1.05e-06 50 23 3 165 3 fimZ Fimbriae Z protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q7A029 1.28e-06 50 44 0 58 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain MW2)
A8Z580 1.28e-06 50 44 0 58 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain USA300 / TCH1516)
Q6G6T0 1.28e-06 50 44 0 58 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain MSSA476)
Q7A3U5 1.28e-06 50 44 0 58 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain N315)
Q99RN8 1.28e-06 50 44 0 58 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain Mu50 / ATCC 700699)
A6QJN1 1.28e-06 50 44 0 58 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain Newman)
Q5HDG5 1.28e-06 50 44 0 58 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain COL)
A5IVH2 1.28e-06 50 44 0 58 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain JH9)
Q2FVM7 1.28e-06 50 44 0 58 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q2FEA6 1.28e-06 50 44 0 58 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain USA300)
A6U4C0 1.28e-06 50 44 0 58 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain JH1)
A7X623 1.28e-06 50 44 0 58 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain Mu3 / ATCC 700698)
Q6GE42 1.31e-06 50 44 0 58 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain MRSA252)
Q2YZ42 1.31e-06 50 44 0 58 3 nreC Oxygen regulatory protein NreC Staphylococcus aureus (strain bovine RF122 / ET3-1)
Q1XDE4 1.61e-06 50 25 5 185 3 ycf29 Probable transcriptional regulator ycf29 Neopyropia yezoensis
Q1M7A0 1.71e-06 50 22 2 135 3 mctR Transcriptional regulatory protein MctR Rhizobium johnstonii (strain DSM 114642 / LMG 32736 / 3841)
Q46791 2.66e-06 48 36 1 65 1 ygeK Uncharacterized response regulatory protein YgeK Escherichia coli (strain K12)
Q4L8Q6 2.87e-06 49 42 1 68 3 nreC Oxygen regulatory protein NreC Staphylococcus haemolyticus (strain JCSC1435)
P59969 3.29e-06 50 36 0 63 4 BQ2027_MB0914C Putative HTH-type transcriptional regulator Mb0914c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WMG0 3.29e-06 50 36 0 63 4 MT0914 Putative HTH-type transcriptional regulator MT0914 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P9WMG1 3.58e-06 50 36 0 63 1 Rv0890c Putative HTH-type transcriptional regulator Rv0890c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Q5HLK6 3.72e-06 49 43 0 58 3 nreC Oxygen regulatory protein NreC Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q7WZY4 3.84e-06 49 25 5 177 1 nreC Oxygen regulatory protein NreC Staphylococcus carnosus (strain TM300)
Q8CN75 4.06e-06 49 43 0 58 3 nreC Oxygen regulatory protein NreC Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
P58664 4.07e-06 49 36 1 65 4 ygeK Uncharacterized response regulatory protein YgeK Escherichia coli O157:H7
P0AED6 4.97e-06 48 20 2 158 3 uvrY Response regulator UvrY Shigella flexneri
P0AED5 4.97e-06 48 20 2 158 1 uvrY Response regulator UvrY Escherichia coli (strain K12)
P66797 5.07e-06 48 20 2 158 3 uvrY Response regulator UvrY Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P66798 5.07e-06 48 20 2 158 3 uvrY Response regulator UvrY Escherichia coli O157:H7
P51343 5.45e-06 48 26 3 141 3 ycf29 Probable transcriptional regulator ycf29 Porphyra purpurea
P48359 1.43e-05 47 25 2 128 3 ycf29 Probable transcriptional regulator ycf29 Cyanophora paradoxa
O07528 2.02e-05 47 28 2 122 3 yhcZ Uncharacterized transcriptional regulatory protein YhcZ Bacillus subtilis (strain 168)
P24908 2.15e-05 47 27 3 169 1 PA0034 Putative transcriptional regulator Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P0ACZ7 2.59e-05 47 25 2 148 1 evgA DNA-binding transcriptional activator EvgA Shigella flexneri
P0ACZ4 2.59e-05 47 25 2 148 1 evgA DNA-binding transcriptional activator EvgA Escherichia coli (strain K12)
P0ACZ5 2.59e-05 47 25 2 148 3 evgA DNA-binding transcriptional activator EvgA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACZ6 2.59e-05 47 25 2 148 3 evgA DNA-binding transcriptional activator EvgA Escherichia coli O157:H7
P31802 2.79e-05 47 24 2 150 3 narP Nitrate/nitrite response regulator protein NarP Escherichia coli (strain K12)
Q7CQM5 5.14e-05 46 24 3 151 1 ssrB Response regulator SsrB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q4L7J5 0.000141 44 24 2 131 3 vraR Response regulator protein VraR Staphylococcus haemolyticus (strain JCSC1435)
P14375 0.000216 45 31 0 64 1 zraR Transcriptional regulatory protein ZraR Escherichia coli (strain K12)
P0AFU5 0.000225 45 27 0 73 1 qseF Transcriptional regulatory protein QseF Escherichia coli O157:H7
P0AFU4 0.000225 45 27 0 73 1 glrR Transcriptional regulatory protein GlrR Escherichia coli (strain K12)
Q8Z333 0.000235 44 24 2 107 3 zraR Transcriptional regulatory protein ZraR Salmonella typhi
P25852 0.000265 44 24 2 107 1 zraR Transcriptional regulatory protein ZraR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8X613 0.000275 44 31 0 64 3 zraR Transcriptional regulatory protein ZraR Escherichia coli O157:H7
Q51373 0.000357 43 26 2 157 3 gacA Response regulator GacA Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P29904 0.000429 43 24 5 179 4 moxX Methanol utilization control regulatory protein MoxX Paracoccus denitrificans
Q49YS9 0.000505 43 23 1 123 3 vraR Response regulator protein VraR Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
P37640 0.000681 42 35 1 57 1 yhjB Putative HTH-type transcriptional regulator YhjB Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_07815
Feature type CDS
Gene fixJ
Product DNA-binding response regulator, FixJ family, consists of REC and HTH domains
Location 88686 - 89315 (strand: -1)
Length 630 (nucleotides) / 209 (amino acids)

Contig

Accession contig_8
Length 164760 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1286
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00072 Response regulator receiver domain
PF00196 Bacterial regulatory proteins, luxR family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4566 Signal transduction mechanisms (T)
Transcription (K)		 TK DNA-binding response regulator, FixJ family, consists of REC and HTH domains

Protein Sequence

MDAVIHLINCADLPGNNINFMLDNMNCEVKSYSSEQAFLKYYVNTPKEHARECIILEVGESSAEAFYLIDELKRLKSIIPVIVITAYPSFETCRRAFKAGILEFFKKPINSELLVNAIHDAFNQYENSLTKYHGYQRVKDKFSKLSAREKEVMDMILEGNTSKEAAQKLSLSPRTVEVHRSNMYTKLRIKSLLQLVQEYDFYKNYSDSI

Flanking regions ( +/- flanking 50bp)

TCCGTTAATATCGGTTTGTTTTGTGTCCTATTTTAATTGAGGAGTAACTTATGGATGCCGTTATTCATTTAATCAACTGTGCTGATTTACCAGGCAACAATATCAATTTCATGCTTGATAATATGAATTGTGAAGTAAAATCTTATTCATCTGAGCAGGCTTTTCTGAAATATTATGTTAATACGCCAAAAGAGCATGCCCGTGAATGTATTATTCTGGAAGTGGGAGAATCATCTGCTGAGGCATTCTATCTTATCGATGAACTCAAACGCCTGAAAAGCATTATTCCTGTGATTGTTATCACCGCTTATCCGTCTTTTGAGACCTGCCGTCGTGCATTTAAAGCGGGTATTCTGGAATTCTTCAAGAAACCGATTAATTCAGAGCTGTTAGTTAATGCGATTCATGACGCATTTAATCAATATGAAAATAGCCTCACTAAGTACCATGGATATCAACGCGTTAAAGATAAATTCAGCAAGTTATCTGCCCGTGAGAAAGAGGTCATGGATATGATTCTGGAAGGAAATACCAGTAAAGAAGCTGCACAAAAATTATCATTATCGCCGCGTACTGTTGAAGTACACCGTTCTAATATGTATACCAAGCTGCGTATTAAATCATTACTACAACTGGTGCAGGAATATGATTTCTATAAAAACTATTCAGATTCAATCTGAGCATTTCCGTTTTTATAATAAACTTTATATTCCGCTTTTATAGTTAATAA