Homologs in group_675

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_02930 EHELCC_02930 100.0 Morganella morganii S2 gLY1 Threonine aldolase
NLDBIP_00530 NLDBIP_00530 100.0 Morganella morganii S4 gLY1 Threonine aldolase
LHKJJB_01505 LHKJJB_01505 100.0 Morganella morganii S3 gLY1 Threonine aldolase
HKOGLL_01545 HKOGLL_01545 100.0 Morganella morganii S5 gLY1 Threonine aldolase
F4V73_RS04835 F4V73_RS04835 91.5 Morganella psychrotolerans - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
PMI_RS06130 PMI_RS06130 83.0 Proteus mirabilis HI4320 - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme

Distribution of the homologs in the orthogroup group_675

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_675

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O50584 7.95e-40 146 31 7 322 1 ltaE Low specificity L-threonine aldolase Pseudomonas sp. (strain NCIMB 10558)
Q9HTF1 2.07e-37 140 29 6 339 3 ltaE Low specificity L-threonine aldolase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P37303 3.47e-14 76 26 7 242 1 GLY1 Low specificity L-threonine aldolase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O74267 5.49e-13 72 25 7 239 3 GLY1 Low-specificity L-threonine aldolase Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
O07051 4.19e-11 66 27 14 320 1 ltaA L-allo-threonine aldolase Aeromonas jandaei
O13427 2.13e-08 58 21 10 304 3 GLY1 Low-specificity L-threonine aldolase Candida albicans
O13940 1.72e-06 52 25 8 238 3 gly1 Probable low-specificity L-threonine aldolase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P58319 0.000117 47 26 12 261 3 ltaE Low specificity L-threonine aldolase Escherichia coli O157:H7
P75823 0.000128 47 26 12 261 1 ltaE Low specificity L-threonine aldolase Escherichia coli (strain K12)
Q9Y600 0.000301 46 26 5 152 1 CSAD Cysteine sulfinic acid decarboxylase Homo sapiens

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_02460
Feature type CDS
Gene gLY1
Product Threonine aldolase
Location 186250 - 187275 (strand: 1)
Length 1026 (nucleotides) / 341 (amino acids)

Contig

Accession contig_2
Length 292399 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_675
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01212 Beta-eliminating lyase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2008 Amino acid transport and metabolism (E) E Threonine aldolase

Kegg Ortholog Annotation(s)

Protein Sequence

MYRFQNDYNEVAHPAVLKAITDTAGHRHDGYGTDTLCGDAAALIKQRIGQPQADIHFFNGGTITNLTAISHFLRPHQAVISVSTGHIATHETGAIEATGHKVITVFSPDGKLTPDHLKPVIAEHNDEHWVQPKLVYITNSTEIGTVYRKAELQALRRFCDEHGLWLYLDGARLASGLMSAQSDLTIEDIAALTDAFYIGGTKIGAIAAEALVINNPALKDDFRFSIKQKGALQAKGWLLGAQFLALFTDDLYFSLGKHLNSMAGQLAAFFTEQGFTFLAPPESNQVFVILPSALAEKLKKQFVFHETLLQEPGKSCLRLCTSWATTQHDIDDFKKTFLSLI

Flanking regions ( +/- flanking 50bp)

TGCGCCGGTAAGTATAAGCATAGTATTACTGCACACTATCGGAGGAGCATATGTACCGTTTTCAGAATGATTATAATGAAGTTGCACATCCGGCTGTTTTAAAAGCCATTACTGACACAGCAGGCCACCGCCATGACGGTTACGGCACGGATACTTTATGCGGTGATGCCGCAGCGCTGATTAAACAGCGGATTGGTCAGCCGCAGGCTGATATCCACTTTTTTAACGGCGGTACAATCACCAACCTGACGGCGATTTCCCATTTTCTGCGTCCGCATCAGGCAGTGATCTCCGTCAGCACCGGCCATATTGCCACCCATGAAACCGGGGCAATTGAAGCGACCGGACACAAAGTCATTACCGTATTTTCCCCTGACGGCAAACTGACACCCGATCATCTTAAACCGGTCATTGCCGAACATAATGATGAGCACTGGGTACAACCGAAACTGGTCTATATTACCAATTCCACTGAGATCGGCACGGTTTACCGTAAAGCAGAATTGCAGGCACTGCGTCGTTTCTGTGATGAGCACGGGTTATGGCTCTATCTTGACGGCGCCCGTCTCGCATCCGGTTTAATGTCTGCACAAAGTGATCTGACAATTGAGGATATCGCAGCACTGACAGATGCGTTCTATATCGGCGGTACCAAAATCGGTGCGATCGCGGCGGAAGCTCTGGTGATCAATAATCCGGCGCTGAAAGATGATTTCCGGTTCAGTATCAAACAGAAGGGCGCTCTTCAGGCAAAAGGCTGGTTGCTGGGTGCTCAGTTCCTGGCGTTGTTTACAGATGACCTCTATTTCTCATTAGGCAAACACCTCAACAGCATGGCCGGACAACTGGCGGCATTCTTTACGGAGCAGGGTTTTACCTTCCTGGCACCGCCGGAATCCAACCAGGTCTTTGTTATTCTGCCTTCCGCACTGGCAGAAAAGCTGAAAAAACAGTTTGTTTTCCATGAAACGCTGTTGCAGGAACCGGGAAAATCCTGTCTGCGTCTGTGCACCTCGTGGGCAACCACACAGCATGATATCGATGACTTTAAAAAGACATTTCTGTCACTGATCTGAGGGTCCGGATAATTTCCGTATTGATAAAACCACGCGGTGAAAACACAGCG