Homologs in group_746

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02460 FBDBKF_02460 83.0 Morganella morganii S1 gLY1 Threonine aldolase
EHELCC_02930 EHELCC_02930 83.0 Morganella morganii S2 gLY1 Threonine aldolase
NLDBIP_00530 NLDBIP_00530 83.0 Morganella morganii S4 gLY1 Threonine aldolase
LHKJJB_01505 LHKJJB_01505 83.0 Morganella morganii S3 gLY1 Threonine aldolase
HKOGLL_01545 HKOGLL_01545 83.0 Morganella morganii S5 gLY1 Threonine aldolase
F4V73_RS04835 F4V73_RS04835 80.9 Morganella psychrotolerans - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme

Distribution of the homologs in the orthogroup group_746

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_746

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O50584 1.39e-34 132 31 5 277 1 ltaE Low specificity L-threonine aldolase Pseudomonas sp. (strain NCIMB 10558)
Q9HTF1 9.58e-33 127 30 4 296 3 ltaE Low specificity L-threonine aldolase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O74267 2.69e-13 73 23 8 288 3 GLY1 Low-specificity L-threonine aldolase Eremothecium gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056)
O07051 1.37e-09 62 28 11 286 1 ltaA L-allo-threonine aldolase Aeromonas jandaei
P37303 7.14e-09 60 23 9 292 1 GLY1 Low specificity L-threonine aldolase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O13940 1.26e-07 56 24 5 233 3 gly1 Probable low-specificity L-threonine aldolase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
O13427 4.86e-07 54 20 8 296 3 GLY1 Low-specificity L-threonine aldolase Candida albicans
P58319 6.37e-06 50 24 14 310 3 ltaE Low specificity L-threonine aldolase Escherichia coli O157:H7
P75823 7.55e-06 50 24 14 310 1 ltaE Low specificity L-threonine aldolase Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS06130
Feature type CDS
Gene -
Product aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
Location 1344809 - 1345834 (strand: 1)
Length 1026 (nucleotides) / 341 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_746
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF01212 Beta-eliminating lyase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2008 Amino acid transport and metabolism (E) E Threonine aldolase

Kegg Ortholog Annotation(s)

Protein Sequence

MYRFQNDYNEIAHPAVMKAITDTVGQRYDGYGMDTLCHQAKELIKQRIKQPEAQIHFFNGGTITNLTAISHFLRPHQAVISVSTGHIATHETGAIEATGHKVITTFSADGKLTPDLLRPILAEHNDEHWVQPKLVYITNATEIGTVYRKAELQALREFCDAHNLWLYLDGARLATGLMSDNSDLTIEDIAHLTDAFYIGGTKIGAMSAEALVICHPALNSDFRFSLKQKGGLQAKGWLLGAQFAALFSDDLYFKLGKHLNEMASQLAAFFTEHGFDFLAPAESNQVFVILPNDIAEKLTQQFVFHRILLDDPQLSCLRLCTSWATTQQDIDDFKVKFLKLI

Flanking regions ( +/- flanking 50bp)

TTCTTTTATCTATAATAGACAGACCAAACACAACATAAATAGGAGTACACGTGTACCGCTTCCAAAATGATTATAATGAAATTGCACATCCTGCGGTCATGAAGGCAATTACAGATACAGTAGGTCAACGTTATGATGGTTATGGTATGGATACCCTTTGTCATCAAGCTAAAGAATTAATCAAACAGCGAATTAAACAACCCGAAGCGCAGATCCATTTTTTTAATGGTGGCACTATCACTAATTTAACCGCTATTTCTCACTTTTTACGCCCACATCAAGCAGTAATTTCTGTCAGCACCGGGCATATTGCGACTCATGAGACGGGAGCGATTGAGGCAACAGGCCATAAAGTGATCACCACTTTTTCTGCTGATGGTAAATTGACCCCAGATTTATTGAGGCCGATCCTCGCTGAACATAACGATGAACATTGGGTGCAACCTAAACTTGTTTATATAACCAATGCCACTGAAATTGGCACGGTATATCGTAAAGCCGAATTACAAGCGTTACGCGAATTTTGTGATGCACATAATTTATGGTTATATCTTGATGGTGCACGTTTAGCGACAGGGTTGATGTCTGATAATAGCGATCTGACGATTGAAGATATCGCACACTTAACAGATGCTTTCTATATTGGCGGCACGAAAATTGGTGCTATGTCAGCAGAAGCATTAGTGATTTGTCATCCTGCATTAAATTCTGATTTTCGCTTTAGCTTAAAACAAAAGGGCGGATTACAGGCAAAAGGTTGGTTATTAGGGGCACAATTCGCGGCATTATTTAGCGACGACCTCTACTTTAAATTAGGTAAACATCTCAATGAGATGGCCTCACAATTAGCCGCATTCTTTACTGAGCATGGTTTTGATTTTTTAGCACCAGCAGAATCTAACCAAGTGTTTGTCATTTTACCTAATGATATTGCAGAAAAGCTAACGCAGCAGTTTGTTTTTCATCGCATATTACTTGACGATCCACAGCTAAGCTGTTTGCGCCTTTGTACTTCTTGGGCAACAACACAACAAGATATTGATGATTTTAAAGTTAAATTTCTTAAACTTATTTAATCGGTCTATCTGTTAGTTTAATCCTTCACTCACTTTATGATATTACGCGT