Homologs in group_2409

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19320 FBDBKF_19320 61.4 Morganella morganii S1 tPR TPR repeat
EHELCC_07605 EHELCC_07605 61.4 Morganella morganii S2 tPR TPR repeat
NLDBIP_07930 NLDBIP_07930 61.4 Morganella morganii S4 tPR TPR repeat
LHKJJB_07465 LHKJJB_07465 61.4 Morganella morganii S3 tPR TPR repeat
HKOGLL_03465 HKOGLL_03465 61.4 Morganella morganii S5 tPR TPR repeat
PMI_RS19655 PMI_RS19655 46.6 Proteus mirabilis HI4320 - hypothetical protein

Distribution of the homologs in the orthogroup group_2409

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2409

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77234 1.55e-09 65 28 6 223 4 ybeQ Sel1-repeat-containing protein YbeQ Escherichia coli (strain K12)
P77234 0.000153 49 23 10 302 4 ybeQ Sel1-repeat-containing protein YbeQ Escherichia coli (strain K12)
Q9UBV2 3.65e-07 58 26 2 186 1 SEL1L Protein sel-1 homolog 1 Homo sapiens
Q9UBV2 0.000531 48 33 6 139 1 SEL1L Protein sel-1 homolog 1 Homo sapiens
Q9Z2G6 4.35e-07 58 26 2 186 1 Sel1l Protein sel-1 homolog 1 Mus musculus
Q9Z2G6 0.000451 48 33 6 139 1 Sel1l Protein sel-1 homolog 1 Mus musculus
Q80Z70 4.59e-07 58 26 2 186 1 Sel1l Protein sel-1 homolog 1 Rattus norvegicus
Q80Z70 0.00055 48 33 6 139 1 Sel1l Protein sel-1 homolog 1 Rattus norvegicus
Q9ESM7 5.63e-07 58 26 2 186 2 Sel1l Protein sel-1 homolog 1 Mesocricetus auratus
Q9ESM7 0.000351 49 33 6 139 2 Sel1l Protein sel-1 homolog 1 Mesocricetus auratus
A0A0H2VDN9 1.45e-06 56 30 3 124 1 esiB Secretory immunoglobulin A-binding protein EsiB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A0A0H2VDN9 2.52e-06 55 24 9 271 1 esiB Secretory immunoglobulin A-binding protein EsiB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q5UP92 2.59e-05 52 30 5 164 4 MIMI_L18 Putative sel1-like repeat-containing protein L18 Acanthamoeba polyphaga mimivirus
Q9LM25 5.42e-05 51 28 4 160 1 HRD3A ERAD-associated E3 ubiquitin-protein ligase component HRD3A Arabidopsis thaliana
Q9LM25 0.000188 50 26 2 184 1 HRD3A ERAD-associated E3 ubiquitin-protein ligase component HRD3A Arabidopsis thaliana
Q3V172 0.000774 47 24 2 186 2 Sel1l2 Protein sel-1 homolog 2 Mus musculus
Q9ZKB5 0.000815 47 27 10 203 3 hcpC Putative beta-lactamase HcpC Helicobacter pylori (strain J99 / ATCC 700824)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16880
Feature type CDS
Gene -
Product SEL1-like repeat protein
Location 206154 - 210824 (strand: 1)
Length 4671 (nucleotides) / 1556 (amino acids)

Contig

Accession term accessions NZ_VXKB01000006 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2409
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF08238 Sel1 repeat

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0790 General function prediction only (R) R TPR repeat

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07126 uncharacterized protein - -

Protein Sequence

MTKQRKYGLILFIIIVLSGGAWLSQSGTAPSDKGYELYLTGDTEGAFRYFSENAEKDPQAAYALAMMYLGGTDIPGNSELGQQWLLASAQAGNKSALYNLGFYRYRGLIKESPDDLYGIDSLKKSAQAGVREAQELLGSIYLHDKYRHIPSDIELSRKYMTDAKEQGSFIAKLGLGYIAYQNDKDYKKAVEILTPLLSEHFTFPAMLLAGIYEEGGNGIAQDLNQAEKYKYMALSQISSVSSEDLEPQPLSLYGSLTQKEVTARRDKLETLAKNGNTHARYTLFYIYADGDGVIPDKEKALTYLQPLIDANDPKAMYVWYVATRSHPDYLKKAADAGYPDALFMLYQVYANIRIDYDIEYDTELAKEYLKRAADTGHRDAMMRIIDTTARSYGYPDKETNKLVSSYLAKLLEKYPQDPAVLMLASERYGDDNGHIYDPVRAFEFNKKAAELSPDPEYQDGLAYKYGHGIGIKQDLKKSIEIYKSLIRNKNNHDISDSYHHLTDIYFTYDGGKYIDEKEIIAFLKEDVDDNKNYRQAYFYADILLRDDPVKNRERAMELYGKAREYTSRADIHQAKALIALNTGENNQALKLVLDVLDNERARYILSPKEWNDAAQILFSEGKDNAVAKNFWVYFALTENNPDAIKLIEPLIGHDPAVSYYYALLKLTQAENQPDMTDEALRPSVELMLTASGLGSSDADEYIISQLKQIENTGNKPVHLQAFLRITGLSERDIVLRYKKCADAGSIRCMYELGEIYVNGNYGEKTDPDIAIAWYEKVPDKDYRFTISRLRDLKEGKAKLAELNALVQKGNAEAAYSLAYAWRNGNYGLKSDHDMWLKYLKISADGGYNDAMISLIDNYSETDTISATDKTNLLHLYEQLADAGEQNYTRKLAAQYLSGSNLVSTDRQKARHYFAKAGREGKYELGEMDKFDRNLQLAGESPDAAYQLGYALLTGNGTQKDQKKSVIYLRQAAQAGHDRAAILLSDILTDGKYDKTAQQWIVEPDLSEAVIWLRQYRGPRDVSENITFYETTLKPALSGDNNAILALGQKYQQQGNNPAAQLWFGKSAETGYVPAFCLQAAMTDNRIKKQEILHRGAEKGDICSEVQLAALSLSDPNFTPDSAEWTDAVSWLEKGIKNEDPAVSAAAFTALAGLYSGNTRNDSGNTFRKPDNEKYLAFLQSVADQRADAQIALFFYYRNNNDIDNAIIYLKKAHDGGDISATELLYTFYMPSKYCEDYRDADKAALYLTEWLKRTPHEKNRRDRYTQQPETDTKQLGDAWLEGYCNIDSNPDNAIAWYKTSLEYHSTHALSAMYDAQVKNQNAAEAYYYGLLAEVSSLNESDLVAGLSEQDRKAIEARVRKTQEYEKYGQFEKETEVRRQKAENGNAGAAFSLAVSYARGETVPEDTTKMLYYYEIAGKNGYARAYNTLGNLYRKPNERGIVTDGEKALSYFDAGAKLGDSNTAHLAGDMLYFGQTGLKKDYARAAQYYDMTSLEQGDHHSLAKYKLALIYYNKLAGTGSDDDLRKARDNLLLAAKYGDKDAIQALKEWDFSRISGH

Flanking regions ( +/- flanking 50bp)

ACCTTAATTAACGACGTTTTCCGGGAGAACCGGCTATTAAAGGGATTGATATGACAAAGCAACGTAAATACGGGCTTATTCTGTTTATTATTATTGTACTGTCCGGAGGAGCCTGGCTGTCACAGTCAGGTACAGCGCCGTCAGATAAAGGCTATGAACTTTATCTGACCGGCGATACCGAAGGTGCATTCCGTTATTTCTCCGAAAATGCAGAAAAAGACCCGCAGGCCGCTTACGCACTGGCAATGATGTATCTCGGTGGTACTGATATACCGGGAAATAGTGAACTGGGGCAGCAATGGCTGCTGGCATCGGCACAGGCCGGAAATAAAAGTGCGCTCTATAATCTTGGTTTTTACCGCTACCGTGGTTTAATAAAAGAGTCACCGGACGACCTCTATGGTATTGATTCCCTGAAAAAATCAGCACAGGCGGGTGTACGGGAGGCACAGGAATTACTGGGCAGCATTTACCTCCACGATAAATACAGACATATTCCGTCAGATATAGAACTGTCCCGCAAATATATGACTGATGCCAAAGAACAAGGGTCATTTATTGCAAAGTTAGGACTGGGATATATCGCTTACCAGAATGATAAAGATTATAAAAAAGCAGTTGAAATTCTTACCCCATTACTCAGTGAGCATTTTACGTTCCCGGCAATGTTACTTGCAGGTATTTATGAAGAAGGCGGTAATGGCATCGCACAGGATCTGAACCAGGCAGAAAAATATAAATATATGGCGCTTTCACAGATAAGCTCTGTGTCCAGTGAAGATCTGGAACCACAACCACTGTCGCTTTACGGCTCACTGACACAGAAAGAAGTAACAGCCCGCCGGGATAAACTTGAAACACTGGCAAAAAATGGAAATACGCATGCCCGTTATACCCTTTTTTATATTTATGCTGATGGTGACGGTGTTATCCCCGATAAAGAAAAAGCCCTCACTTATCTGCAACCACTGATCGATGCCAACGATCCGAAAGCGATGTATGTCTGGTATGTTGCCACCCGCTCACATCCTGATTATCTGAAAAAAGCGGCTGATGCCGGTTATCCCGATGCACTTTTTATGCTGTATCAGGTTTATGCCAATATCCGCATAGACTACGACATAGAATATGACACTGAGCTGGCGAAAGAATATCTGAAACGTGCAGCGGATACCGGGCACCGCGATGCAATGATGAGAATCATCGACACCACAGCGCGCAGTTATGGCTATCCGGATAAGGAAACCAATAAGCTTGTTTCATCCTATTTAGCCAAATTGCTGGAAAAATATCCGCAAGACCCCGCTGTGCTTATGCTGGCATCTGAGCGTTATGGTGATGACAATGGTCATATTTACGATCCCGTCCGTGCATTTGAGTTTAATAAAAAAGCAGCGGAACTATCACCAGACCCGGAATATCAGGATGGTCTTGCTTATAAATACGGGCATGGCATTGGTATTAAACAAGATCTGAAAAAATCAATTGAGATATATAAATCACTTATCCGTAACAAAAATAATCATGATATAAGTGATAGCTATCACCACTTAACAGATATTTATTTTACTTACGATGGCGGGAAATATATTGATGAAAAAGAGATTATTGCTTTCCTGAAAGAAGATGTCGATGACAATAAAAACTATCGGCAAGCTTATTTCTATGCCGACATTCTGCTCCGCGACGATCCGGTTAAAAACCGGGAACGGGCCATGGAGTTATACGGAAAAGCACGGGAATACACATCACGCGCAGATATTCACCAGGCAAAAGCACTTATCGCGCTGAATACCGGAGAAAACAACCAGGCACTGAAACTGGTTCTGGATGTACTTGATAATGAACGCGCCCGTTATATTCTGTCACCAAAAGAATGGAATGATGCGGCACAAATCCTGTTCAGCGAGGGAAAGGACAATGCTGTTGCAAAAAATTTCTGGGTATATTTTGCGCTGACAGAGAATAATCCGGATGCCATAAAACTGATCGAACCACTAATCGGTCATGATCCTGCTGTCAGTTATTACTATGCGTTATTAAAATTAACACAGGCAGAAAATCAACCGGATATGACAGACGAGGCATTGCGTCCGTCTGTTGAGCTGATGCTGACTGCATCCGGACTCGGTAGTTCAGATGCGGACGAATATATTATTTCTCAGTTAAAACAAATTGAGAACACAGGAAATAAACCGGTTCATCTGCAGGCCTTTTTACGAATAACAGGACTTTCTGAACGGGATATTGTTCTCCGGTATAAAAAGTGTGCCGATGCCGGAAGCATCCGCTGCATGTATGAATTAGGGGAGATTTATGTCAATGGTAATTACGGTGAAAAAACGGATCCGGATATCGCTATCGCCTGGTATGAAAAAGTTCCGGACAAAGATTACCGGTTTACCATCTCACGTCTGAGAGACCTGAAAGAGGGCAAAGCCAAGCTTGCTGAGCTGAACGCACTGGTACAAAAAGGCAATGCAGAAGCTGCCTATTCATTAGCCTACGCCTGGAGAAACGGTAACTACGGGCTGAAAAGCGATCACGACATGTGGCTGAAATATCTGAAAATAAGTGCTGATGGTGGCTATAACGATGCCATGATCTCACTCATCGACAATTACAGTGAAACCGATACTATCAGTGCCACCGATAAAACCAATCTCCTGCACCTGTATGAACAACTTGCCGATGCCGGTGAGCAAAATTACACACGCAAACTGGCTGCCCAGTATCTCAGCGGCAGCAATCTGGTCAGCACCGATCGTCAGAAAGCCCGCCATTACTTTGCCAAAGCCGGCAGAGAGGGAAAGTATGAACTCGGGGAGATGGATAAGTTTGATCGTAACCTGCAACTCGCCGGTGAAAGTCCGGATGCCGCTTACCAGTTAGGTTATGCACTTCTGACAGGAAATGGTACACAAAAAGATCAGAAAAAATCCGTCATTTACCTCCGGCAGGCGGCACAAGCCGGTCATGACCGGGCGGCTATTCTGCTTTCAGATATACTAACAGACGGTAAATATGACAAAACTGCGCAGCAGTGGATTGTAGAGCCGGATCTGAGTGAAGCTGTTATCTGGCTGCGCCAGTACCGGGGACCGCGTGATGTGTCAGAAAATATCACATTCTATGAAACTACTCTTAAACCGGCTCTCAGCGGAGATAATAACGCCATCCTGGCGCTCGGGCAGAAGTATCAGCAGCAGGGAAATAACCCGGCGGCACAACTCTGGTTCGGGAAAAGCGCTGAAACCGGCTATGTCCCTGCATTTTGTTTACAAGCGGCGATGACTGATAACCGGATAAAAAAACAGGAAATACTGCACCGGGGCGCGGAGAAAGGGGATATCTGTTCTGAAGTACAACTTGCGGCACTTTCTTTAAGCGACCCCAACTTTACACCGGATTCTGCTGAGTGGACTGATGCTGTTTCATGGCTGGAAAAAGGTATAAAAAATGAGGACCCGGCAGTGTCGGCGGCAGCATTTACGGCGCTGGCAGGTCTCTACAGTGGTAATACACGTAATGACAGCGGAAATACATTCAGGAAGCCGGATAATGAAAAATATCTCGCTTTCCTGCAATCCGTTGCCGATCAACGGGCAGATGCACAGATAGCTCTGTTCTTCTATTACCGCAATAACAATGATATTGATAACGCCATAATTTATCTGAAAAAAGCACATGACGGCGGGGATATTTCCGCAACAGAATTGCTGTATACATTCTATATGCCATCCAAGTATTGCGAAGACTATAGAGATGCCGATAAAGCCGCTCTGTACCTGACTGAATGGCTTAAACGAACCCCGCACGAAAAAAATCGCCGGGATCGCTACACGCAACAGCCGGAAACTGACACTAAACAACTGGGAGATGCCTGGCTGGAGGGGTACTGTAATATTGATTCAAATCCTGATAACGCCATTGCCTGGTATAAAACATCACTGGAGTACCATTCCACCCATGCGTTGTCTGCCATGTATGACGCACAGGTCAAAAATCAGAATGCCGCAGAAGCCTATTACTACGGATTATTAGCGGAGGTTTCTTCCCTGAATGAGTCAGATCTGGTTGCCGGGCTTTCAGAGCAGGATCGTAAAGCGATTGAAGCGCGTGTCCGTAAAACACAGGAATATGAAAAATACGGTCAATTTGAAAAAGAAACAGAGGTGCGCCGTCAAAAGGCTGAAAACGGGAATGCAGGTGCTGCGTTCTCCCTGGCAGTAAGTTATGCGCGGGGGGAAACCGTACCGGAAGATACGACAAAAATGCTGTATTACTATGAAATCGCGGGTAAAAATGGTTATGCACGCGCCTATAATACATTAGGTAATTTGTACCGCAAGCCAAATGAACGCGGGATAGTGACTGATGGTGAAAAAGCCCTTTCCTATTTTGATGCAGGCGCAAAACTGGGAGACAGTAATACCGCTCATCTTGCCGGTGATATGCTCTATTTCGGTCAGACCGGACTGAAAAAAGATTATGCCCGGGCCGCGCAATATTATGATATGACATCATTAGAGCAAGGGGATCACCATAGCCTGGCAAAATATAAACTGGCCCTGATTTATTACAATAAACTGGCAGGAACAGGCAGTGATGACGACCTGCGTAAAGCGCGGGATAACCTGTTACTGGCGGCAAAATACGGCGATAAAGATGCCATACAGGCGCTGAAAGAGTGGGATTTCTCCCGTATTTCCGGGCACTGATTCAGGAAAAAACACTAGTCAGGACTATTTAAAATCAGATGACCAAGTTT